RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 FDXACB1Q9BRP7 624 aaPredicted RBP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 LMAN2LQ9H0V9 348 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 TMEM60Q9H2L4 133 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 DHX33Q9H6R0 707 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 CWH43Q9H720 699 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 ELAC1Q9H777 363 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 CD320Q9NPF0 282 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 TYW1Q9NV66 732 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 SUCLA2Q9P2R7 463 aaPredicted RBP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 PCDHGC5Q9Y5F6 944 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 H3BQ06 376 aaPredicted RBP14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 CSPG5O95196 566 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 CYP4A11Q02928 519 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 DLX2Q07687 328 aaPredicted RBP14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 ECHDC2Q86YB7 292 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 RHPN2Q8IUC4 686 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 SLFN12Q8IYM2 578 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 PABPC5Q96DU9 382 aaKnown RBP14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 C8orf76Q96K31 380 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 ATP6V0A4Q9HBG4 840 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 IFT122Q9HBG6 1241 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 BRMS1Q9HCU9 246 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 ARID2Q68CP9 1835 aa14.2□□□□□ -0.14
SEC61A1-206ENST00000491668 A0A0U1RQF3 1178 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 H3BQV1 296 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 LINC01565O15544 149 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 YWHABP31946 246 aaKnown RBP14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 GNL2Q13823 731 aaKnown RBP14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 SAFBQ15424 915 aaKnown RBP eCLIP14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 CALCRLQ16602 461 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 NAALADL2Q58DX5 795 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 ADGRD2Q7Z7M1 963 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 PRPF31Q8WWY3 499 aaKnown RBP14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 KHSRPQ92945 711 aaKnown RBP eCLIP14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 TMEM143Q96AN5 459 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 CEP170P1Q96L14 293 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 SCLT1Q96NL6 688 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 EIF2AK1Q9BQI3 630 aaKnown RBP14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 GCOM2Q9BZD3 368 aaPredicted RBP14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 MINDY3Q9H8M7 445 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 BMP2KQ9NSY1 1161 aaPredicted RBP14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 PCDHA12Q9UN75 941 aa14.19□□□□□ -0.14
SEC61A1-206ENST00000491668 GRXCR2A6NFK2 248 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 NEMFO60524 1076 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 LYPLA2O95372 231 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 IL9P15248 144 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 PDCP20941 246 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 DNM2P50570 870 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 LARP1BQ659C4 914 aaKnown RBP14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 ZNF410Q86VK4 478 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 COLGALT1Q8NBJ5 622 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 POF1BQ8WVV4 589 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 NLRP4Q96MN2 994 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 TMEM117Q9H0C3 514 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 ZSWIM4Q9H7M6 989 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 TTC12Q9H892 705 aaPredicted RBP14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 XPNPEP1Q9NQW7 623 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 COL4A3BPQ9Y5P4 624 aa14.18□□□□□ -0.14
SEC61A1-206ENST00000491668 A0A087WWV3 80 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 MEIS3P2A8K0S8 358 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 MARCH6O60337 910 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 DKC1O60832 514 aaKnown RBP eCLIP14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 TBX10O75333 385 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 BAG4O95429 457 aaKnown RBP14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 SPATA31C1P0DKV0 1188 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 ZSCAN20P17040 1043 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 PBX3P40426 434 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 RFC5P40937 340 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 TXKP42681 527 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 POLGP54098 1239 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 CDC42EP1Q00587 391 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 LAMTOR4Q0VGL1 99 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 EMC2Q15006 297 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 PTCRAQ6ISU1 281 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 TPH2Q8IWU9 490 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 RNF169Q8NCN4 708 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 FBXO18Q8NFZ0 1043 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 SLC7A3Q8WY07 619 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 TRAIPQ9BWF2 469 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 CHST12Q9NRB3 414 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 CLDND1Q9NY35 253 aa14.17□□□□□ -0.14
SEC61A1-206ENST00000491668 POTEMA6NI47 508 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 FGF18O76093 207 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 ATP2B1P20020 1258 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 HOXA11P31270 313 aaPredicted RBP14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 MCM7P33993 719 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 PHKA2P46019 1235 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 ERVFC1P60507 584 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 ADAM15Q13444 863 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 XKR9Q5GH70 373 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 FAM178BQ8IXR5 827 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 HELQQ8TDG4 1101 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 LPPQ93052 612 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 PPME1Q9Y570 386 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 PCDHB12Q9Y5F1 795 aa14.16□□□□□ -0.14
SEC61A1-206ENST00000491668 VPS37CA5D8V6 355 aaPredicted RBP14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 GLP2RO95838 553 aa14.15□□□□□ -0.14
SEC61A1-206ENST00000491668 EOMESO95936 686 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms