RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CAPSQ13938 189 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 MORC3Q14149 939 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 ZNF658Q5TYW1 1059 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-230ENST00000491028 SASS6Q6UVJ0 657 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 ANKRD33Q7Z3H0 272 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 RHPN2Q8IUC4 686 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 BSNDQ8WZ55 320 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 CTAGE1Q96RT6 745 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 FIZ1Q96SL8 496 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 NTPCRQ9BSD7 190 aaKnown RBP20.57■□□□□ 0.88
MCF2L-230ENST00000491028 FAM49AQ9H0Q0 323 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-230ENST00000491028 ST6GALNAC4Q9H4F1 302 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 TRMT13Q9NUP7 481 aaKnown RBP20.57■□□□□ 0.88
MCF2L-230ENST00000491028 SIP14410 1827 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 KIAA0100Q14667 2235 aaKnown RBP20.57■□□□□ 0.88
MCF2L-230ENST00000491028 NPTX2P47972 431 aa20.56■□□□□ 0.88
MCF2L-230ENST00000491028 ALCAMQ13740 583 aa20.56■□□□□ 0.88
MCF2L-230ENST00000491028 STXBP4Q6ZWJ1 553 aa20.56■□□□□ 0.88
MCF2L-230ENST00000491028 ZNF410Q86VK4 478 aa20.56■□□□□ 0.88
MCF2L-230ENST00000491028 DNAJB3Q8WWF6 145 aa20.56■□□□□ 0.88
MCF2L-230ENST00000491028 KCNN1Q92952 543 aa20.56■□□□□ 0.88
MCF2L-230ENST00000491028 TOX2Q96NM4 488 aa20.56■□□□□ 0.88
MCF2L-230ENST00000491028 MRPL44Q9H9J2 332 aaKnown RBP20.56■□□□□ 0.88
MCF2L-230ENST00000491028 KMT5AQ9NQR1 393 aa20.56■□□□□ 0.88
MCF2L-230ENST00000491028 PHLPP2Q6ZVD8 1323 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 SYCE3A1L190 88 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 LRRIQ4A6NIV6 560 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 K7ENM7 598 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 BIN1O00499 593 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 CD4P01730 458 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 VTNP04004 478 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 EN2P19622 333 aaPredicted RBP20.55■□□□□ 0.88
MCF2L-230ENST00000491028 PPP1R2P41236 205 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 GPC3P51654 580 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 ATN1P54259 1190 aaPredicted RBP20.55■□□□□ 0.88
MCF2L-230ENST00000491028 COBLL1Q53SF7 1204 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 UBE2Q1Q7Z7E8 422 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 CCDC155Q8N6L0 562 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 DEPTORQ8TB45 409 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 ANP32EQ9BTT0 268 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 NFKBIZQ9BYH8 718 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 TRPV6Q9H1D0 765 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 C2orf40Q9H1Z8 148 aa20.55■□□□□ 0.88
MCF2L-230ENST00000491028 UBE4BO95155 1302 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 CCDC169A6NNP5 214 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 M0QZ92 97 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 EIF3DO15371 548 aaKnown RBP eCLIP20.54■□□□□ 0.88
MCF2L-230ENST00000491028 KIF20AO95235 890 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 PHKA2P46019 1235 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 NLRP12P59046 1061 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 RBL2Q08999 1139 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 STK4Q13043 487 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 CDCA2Q69YH5 1023 aaPredicted RBP20.54■□□□□ 0.88
MCF2L-230ENST00000491028 ZNF720Q7Z2F6 126 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 IFNLR1Q8IU57 520 aaPredicted RBP20.54■□□□□ 0.88
MCF2L-230ENST00000491028 ZBTB8OSQ8IWT0 167 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 RNF149Q8NC42 400 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 KIAA0895Q8NCT3 520 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 DHX38Q92620 1227 aaKnown RBP20.54■□□□□ 0.88
MCF2L-230ENST00000491028 HVCN1Q96D96 273 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 NLRP4Q96MN2 994 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 SLC39A2Q9NP94 309 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 TBC1D7Q9P0N9 293 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 ARHGAP28Q9P2N2 729 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 GDAQ9Y2T3 454 aa20.54■□□□□ 0.88
MCF2L-230ENST00000491028 BRCA2P51587 3418 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 DCDC2CA8MYV0 355 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 PQBP1O60828 265 aaKnown RBP20.53■□□□□ 0.88
MCF2L-230ENST00000491028 GCNT3O95395 438 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 CCDC192P0DO97 292 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 NMT1P30419 496 aaKnown RBP20.53■□□□□ 0.88
MCF2L-230ENST00000491028 EFNA5P52803 228 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 NLRP11P59045 1033 aaKnown RBP20.53■□□□□ 0.88
MCF2L-230ENST00000491028 MRPS6P82932 125 aaKnown RBP20.53■□□□□ 0.88
MCF2L-230ENST00000491028 STX1AQ16623 288 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 TRIM71Q2Q1W2 868 aaKnown RBP20.53■□□□□ 0.88
MCF2L-230ENST00000491028 TRIM60Q495X7 471 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 ISM2Q6H9L7 571 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 HAUS6Q7Z4H7 955 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 KSR1Q8IVT5 923 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 TMEM161BQ8NDZ6 487 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 CAGE1Q8TC20 777 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 NLRP7Q8WX94 980 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 WNT8BQ93098 351 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 HPS3Q969F9 1004 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 ANO10Q9NW15 660 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 PCDHB13Q9Y5F0 798 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 TRPV2Q9Y5S1 764 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 ADGRA3Q8IWK6 1321 aa20.53■□□□□ 0.88
MCF2L-230ENST00000491028 A0A087WZ62 844 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 CCDC85CA6NKD9 419 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 SLC16A4O15374 487 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 GPR32O75388 356 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 PPP1R37O75864 691 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 BMP6P22004 513 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 PTENP60484 403 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 GTF2BQ00403 316 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 TYRO3Q06418 890 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 STIM1Q13586 685 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 EPM2AIP1Q7L775 607 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms