RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 PPP2R5CQ13362 524 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 CLLU1OSQ5K130 101 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 PPP4R3AQ6IN85 833 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 KCNT2Q6UVM3 1135 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 NECAB1Q8N987 351 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 WASF1Q92558 559 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 FAM20AQ96MK3 541 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 NLRP4Q96MN2 994 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 ZNF558Q96NG5 402 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 KCNMB3Q9NPA1 279 aa23.52■■□□□ 1.36
SYNE4-205ENST00000490730 PUF60Q9UHX1 559 aaKnown RBP23.52■■□□□ 1.36
SYNE4-205ENST00000490730 IGKV6-21A0A0C4DH24 114 aa23.51■■□□□ 1.35
SYNE4-205ENST00000490730 A0A0U1RQF3 1178 aa23.51■■□□□ 1.35
SYNE4-205ENST00000490730 C19orf67A6NJJ6 358 aa23.51■■□□□ 1.35
SYNE4-205ENST00000490730 MAFO75444 373 aaPredicted RBP23.51■■□□□ 1.35
SYNE4-205ENST00000490730 CTDNEP1O95476 244 aa23.51■■□□□ 1.35
SYNE4-205ENST00000490730 RBM10P98175 930 aaKnown RBP23.51■■□□□ 1.35
SYNE4-205ENST00000490730 TWF2Q6IBS0 349 aaKnown RBP23.51■■□□□ 1.35
SYNE4-205ENST00000490730 KSR1Q8IVT5 923 aa23.51■■□□□ 1.35
SYNE4-205ENST00000490730 MRPS27Q92552 414 aaKnown RBP23.51■■□□□ 1.35
SYNE4-205ENST00000490730 FAM122AQ96E09 287 aa23.51■■□□□ 1.35
SYNE4-205ENST00000490730 NAP1L4Q99733 375 aaKnown RBP23.51■■□□□ 1.35
SYNE4-205ENST00000490730 TCF25Q9BQ70 676 aa23.51■■□□□ 1.35
SYNE4-205ENST00000490730 JPH2Q9BR39 696 aaPredicted RBP23.51■■□□□ 1.35
SYNE4-205ENST00000490730 CYP26B1Q9NR63 512 aa23.51■■□□□ 1.35
SYNE4-205ENST00000490730 PIN4Q9Y237 131 aaKnown RBP23.51■■□□□ 1.35
SYNE4-205ENST00000490730 DKC1O60832 514 aaKnown RBP eCLIP23.5■■□□□ 1.35
SYNE4-205ENST00000490730 PPM1AP35813 382 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 NPEPPSP55786 919 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 LONRF3Q496Y0 759 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 NCAPH2Q6IBW4 605 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 PDE12Q6L8Q7 609 aaKnown RBP23.5■■□□□ 1.35
SYNE4-205ENST00000490730 ZNF410Q86VK4 478 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 POTEDQ86YR6 584 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 SLC7A3Q8WY07 619 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 CEP170P1Q96L14 293 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 BRMS1Q9HCU9 246 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 BMP2KQ9NSY1 1161 aaPredicted RBP23.5■■□□□ 1.35
SYNE4-205ENST00000490730 LZTS1Q9Y250 596 aa23.5■■□□□ 1.35
SYNE4-205ENST00000490730 FAM205CA6NFA0 338 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 FSCN2O14926 492 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 EYA4O95677 639 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 EOMESO95936 686 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 P4HBP07237 508 aaKnown RBP23.49■■□□□ 1.35
SYNE4-205ENST00000490730 KRT2P35908 639 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 FOSBP53539 338 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 POLGP54098 1239 aaPredicted RBP23.49■■□□□ 1.35
SYNE4-205ENST00000490730 PLCB3Q01970 1234 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 KRT17Q04695 432 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 COASYQ13057 564 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 DUSP6Q16828 381 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 EARS2Q5JPH6 523 aaKnown RBP23.49■■□□□ 1.35
SYNE4-205ENST00000490730 CATSPER4Q7RTX7 472 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 ZNF598Q86UK7 904 aaKnown RBP23.49■■□□□ 1.35
SYNE4-205ENST00000490730 SMRP1Q8NCR6 262 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 HAS1Q92839 578 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 CDCA3Q99618 268 aaPredicted RBP23.49■■□□□ 1.35
SYNE4-205ENST00000490730 LXNQ9BS40 222 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 INO80BQ9C086 356 aaPredicted RBP23.49■■□□□ 1.35
SYNE4-205ENST00000490730 CHST12Q9NRB3 414 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 SPG21Q9NZD8 308 aa23.49■■□□□ 1.35
SYNE4-205ENST00000490730 PRR33A8MZF0 331 aa23.48■■□□□ 1.35
SYNE4-205ENST00000490730 ATF7P17544 494 aaPredicted RBP23.48■■□□□ 1.35
SYNE4-205ENST00000490730 CA8P35219 290 aa23.48■■□□□ 1.35
SYNE4-205ENST00000490730 PLA2G5P39877 138 aa23.48■■□□□ 1.35
SYNE4-205ENST00000490730 NR5A1Q13285 461 aa23.48■■□□□ 1.35
SYNE4-205ENST00000490730 LLGL2Q6P1M3 1020 aa23.48■■□□□ 1.35
SYNE4-205ENST00000490730 TMC7Q7Z402 723 aa23.48■■□□□ 1.35
SYNE4-205ENST00000490730 ZNF579Q8NAF0 562 aaKnown RBP23.48■■□□□ 1.35
SYNE4-205ENST00000490730 LPPQ93052 612 aa23.48■■□□□ 1.35
SYNE4-205ENST00000490730 MRPL9Q9BYD2 267 aaKnown RBP23.48■■□□□ 1.35
SYNE4-205ENST00000490730 WRAP73Q9P2S5 460 aaPredicted RBP23.48■■□□□ 1.35
SYNE4-205ENST00000490730 USP15Q9Y4E8 981 aaPredicted RBP23.48■■□□□ 1.35
SYNE4-205ENST00000490730 FSD2A1L4K1 749 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 TBX3O15119 743 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 BAG4O95429 457 aaKnown RBP23.47■■□□□ 1.35
SYNE4-205ENST00000490730 LARGE1O95461 756 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 SRGAP2BP0DMP2 458 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 PHKA2P46019 1235 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 ME3Q16798 604 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 VN1R2Q8NFZ6 395 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 GTF3C6Q969F1 213 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 TMEM143Q96AN5 459 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 RGL1Q9NZL6 768 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 MUTYHQ9UIF7 546 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 COL4A3BPQ9Y5P4 624 aa23.47■■□□□ 1.35
SYNE4-205ENST00000490730 HIDE1A8MVS5 230 aa23.46■■□□□ 1.35
SYNE4-205ENST00000490730 SRGAP2CP0DJJ0 459 aa23.46■■□□□ 1.35
SYNE4-205ENST00000490730 FDPSP14324 419 aaKnown RBP23.46■■□□□ 1.35
SYNE4-205ENST00000490730 CYP4A11Q02928 519 aa23.46■■□□□ 1.35
SYNE4-205ENST00000490730 EPHA7Q15375 998 aa23.46■■□□□ 1.35
SYNE4-205ENST00000490730 RNF135Q8IUD6 432 aa23.46■■□□□ 1.35
SYNE4-205ENST00000490730 SLFN12Q8IYM2 578 aa23.46■■□□□ 1.35
SYNE4-205ENST00000490730 DYDC2Q96IM9 177 aa23.46■■□□□ 1.35
SYNE4-205ENST00000490730 NGRNQ9NPE2 291 aaKnown RBP23.46■■□□□ 1.35
SYNE4-205ENST00000490730 INPP5FQ9Y2H2 1132 aa23.46■■□□□ 1.35
SYNE4-205ENST00000490730 ARID2Q68CP9 1835 aa23.45■■□□□ 1.34
SYNE4-205ENST00000490730 NT5C1B-RDH14C9J2C7 533 aa23.45■■□□□ 1.34
SYNE4-205ENST00000490730 ZC3H11AO75152 810 aaKnown RBP eCLIP23.45■■□□□ 1.34
SYNE4-205ENST00000490730 SKIP12755 728 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms