RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 NLRP7Q8WX94 980 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 NLRP4Q96MN2 994 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 INO80BQ9C086 356 aaPredicted RBP12.09□□□□□ -0.47
VARS2-210ENST00000490699 PCDHB13Q9Y5F0 798 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 PCDHA5Q9Y5H7 936 aa12.09□□□□□ -0.47
VARS2-210ENST00000490699 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 PQBP1O60828 265 aaKnown RBP12.08□□□□□ -0.48
VARS2-210ENST00000490699 GCNT3O95395 438 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 CCDC192P0DO97 292 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 MAPTP10636 758 aaKnown RBP12.08□□□□□ -0.48
VARS2-210ENST00000490699 HOXC8P31273 242 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 MDM2Q00987 491 aaPredicted RBP12.08□□□□□ -0.48
VARS2-210ENST00000490699 LAMTOR4Q0VGL1 99 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 TMEM132AQ24JP5 1023 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 C1orf53Q5VUE5 145 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 SERINC5Q86VE9 423 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 SFR1Q86XK3 245 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 SLC43A3Q8NBI5 491 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 CAGE1Q8TC20 777 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 PRPF31Q8WWY3 499 aaKnown RBP12.08□□□□□ -0.48
VARS2-210ENST00000490699 DNAJC19Q96DA6 116 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 ABHD8Q96I13 439 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 HTATIP2Q9BUP3 242 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 GCOM2Q9BZD3 368 aaPredicted RBP12.08□□□□□ -0.48
VARS2-210ENST00000490699 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
VARS2-210ENST00000490699 GPRC5CQ9NQ84 441 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 XPNPEP1Q9NQW7 623 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 OLFML3Q9NRN5 406 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 ANO10Q9NW15 660 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 TMEM63CQ9P1W3 806 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 PRKAG2Q9UGJ0 569 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 EXOC7Q9UPT5 735 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 ATP11BQ9Y2G3 1177 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 UBE4BO95155 1302 aa12.08□□□□□ -0.48
VARS2-210ENST00000490699 FRMD3A2A2Y4 597 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 CCDC85CA6NKD9 419 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 SFI1A8K8P3 1242 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 RSPH10B2B2RC85 870 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 B4GALT4O60513 344 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 RHOBTB3O94955 611 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 VTNP04004 478 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 RSPH10BP0C881 870 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 SRGAP2CP0DJJ0 459 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 COL6A1P12109 1028 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 CASP1P29466 404 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 ARL2P36404 184 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 THPOP40225 353 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 ZNF131P52739 623 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 ADAM17P78536 824 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 MRPS6P82932 125 aaKnown RBP12.07□□□□□ -0.48
VARS2-210ENST00000490699 HSP90AA2PQ14568 343 aaPredicted RBP12.07□□□□□ -0.48
VARS2-210ENST00000490699 STX1AQ16623 288 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 MARCH8Q5T0T0 291 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 COL13A1Q5TAT6 717 aaPredicted RBP12.07□□□□□ -0.48
VARS2-210ENST00000490699 NT5DC1Q5TFE4 455 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 ZNF658Q5TYW1 1059 aaPredicted RBP12.07□□□□□ -0.48
VARS2-210ENST00000490699 RNF149Q8NC42 400 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 PPP1R13LQ8WUF5 828 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 DNAJB3Q8WWF6 145 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 HVCN1Q96D96 273 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 TOX2Q96NM4 488 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 CEP89Q96ST8 783 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 PDLIM7Q9NR12 457 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 TRMT13Q9NUP7 481 aaKnown RBP12.07□□□□□ -0.48
VARS2-210ENST00000490699 GINS2Q9Y248 185 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 HTTP42858 3142 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 GRIN2DO15399 1336 aa12.07□□□□□ -0.48
VARS2-210ENST00000490699 SYCE3A1L190 88 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 BIN1O00499 593 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 PSMA7O14818 248 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 ERLIN2O94905 339 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 EN2P19622 333 aaPredicted RBP12.06□□□□□ -0.48
VARS2-210ENST00000490699 SFPQP23246 707 aaKnown RBP eCLIP12.06□□□□□ -0.48
VARS2-210ENST00000490699 GLRA2P23416 452 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 NPTX2P47972 431 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 CDK7P50613 346 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 NLRP11P59045 1033 aaKnown RBP12.06□□□□□ -0.48
VARS2-210ENST00000490699 ZNF200P98182 395 aaPredicted RBP12.06□□□□□ -0.48
VARS2-210ENST00000490699 POU5F1BQ06416 359 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 PCBP1Q15365 356 aaKnown RBP eCLIP12.06□□□□□ -0.48
VARS2-210ENST00000490699 MAPK6Q16659 721 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 ZSCAN23Q3MJ62 389 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 ANKRD33Q7Z3H0 272 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 APBB1IPQ7Z5R6 666 aaPredicted RBP12.06□□□□□ -0.48
VARS2-210ENST00000490699 SRGAP1Q7Z6B7 1085 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 RPAINQ86UA6 219 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 FAM126BQ8IXS8 530 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 KIAA0319LQ8IZA0 1049 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 MYOCDQ8IZQ8 938 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 SYCP3Q8IZU3 236 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 MLKLQ8NB16 471 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 DIS3LQ8TF46 1054 aaKnown RBP12.06□□□□□ -0.48
VARS2-210ENST00000490699 BICD1Q96G01 975 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 TSG101Q99816 390 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 GZF1Q9H116 711 aaPredicted RBP12.06□□□□□ -0.48
VARS2-210ENST00000490699 TRPV6Q9H1D0 765 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 TMEM206Q9H813 350 aa12.06□□□□□ -0.48
VARS2-210ENST00000490699 TBC1D7Q9P0N9 293 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms