RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 THNSL1Q8IYQ7 743 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 COLGALT1Q8NBJ5 622 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.58□□□□□ -0.56
RBM39-236ENST00000490484 SPPL3Q8TCT6 385 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 NEK9Q8TD19 979 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 POF1BQ8WVV4 589 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 TMEM143Q96AN5 459 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 LLPHQ9BRT6 129 aaKnown RBP11.58□□□□□ -0.56
RBM39-236ENST00000490484 TMEM117Q9H0C3 514 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 DHX33Q9H6R0 707 aaKnown RBP11.58□□□□□ -0.56
RBM39-236ENST00000490484 ZSWIM4Q9H7M6 989 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 TTC12Q9H892 705 aaPredicted RBP11.58□□□□□ -0.56
RBM39-236ENST00000490484 AAASQ9NRG9 546 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 RNF19AQ9NV58 838 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 TYW1Q9NV66 732 aaKnown RBP11.58□□□□□ -0.56
RBM39-236ENST00000490484 DACT1Q9NYF0 836 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 PCDHA12Q9UN75 941 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 PIN4Q9Y237 131 aaKnown RBP11.58□□□□□ -0.56
RBM39-236ENST00000490484 PCDHB12Q9Y5F1 795 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 PCDHGC5Q9Y5F6 944 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 A0A0U1RQF3 1178 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 POTEMA6NI47 508 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 ZBTB39O15060 712 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 FGF18O76093 207 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 ATF7P17544 494 aaPredicted RBP11.57□□□□□ -0.56
RBM39-236ENST00000490484 LAG3P18627 525 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 PBX3P40426 434 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 CDC42EP1Q00587 391 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 COL19A1Q14993 1142 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 CLUL1Q15846 466 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 CLLU1OSQ5K130 101 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 TWF2Q6IBS0 349 aaKnown RBP11.57□□□□□ -0.56
RBM39-236ENST00000490484 OTUD6AQ7L8S5 288 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 CATSPER4Q7RTX7 472 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 ADGRD2Q7Z7M1 963 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 FAM184AQ8NB25 1140 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 HELQQ8TDG4 1101 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 PSPC1Q8WXF1 523 aaKnown RBP11.57□□□□□ -0.56
RBM39-236ENST00000490484 CASD1Q96PB1 797 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 MTRQ99707 1265 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 EIF2AK1Q9BQI3 630 aaKnown RBP11.57□□□□□ -0.56
RBM39-236ENST00000490484 TMEM60Q9H2L4 133 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 IGFLR1Q9H665 355 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 CWH43Q9H720 699 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 SH2B1Q9NRF2 756 aaPredicted RBP11.57□□□□□ -0.56
RBM39-236ENST00000490484 PPME1Q9Y570 386 aa11.57□□□□□ -0.56
RBM39-236ENST00000490484 LINC01565O15544 149 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 TBX10O75333 385 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 SLITRK3O94933 977 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 SRGAP2CP0DJJ0 459 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 RBM25P49756 843 aaKnown RBP11.56□□□□□ -0.56
RBM39-236ENST00000490484 HMGN5P82970 282 aaKnown RBP11.56□□□□□ -0.56
RBM39-236ENST00000490484 DLX2Q07687 328 aaPredicted RBP11.56□□□□□ -0.56
RBM39-236ENST00000490484 GNL2Q13823 731 aaKnown RBP11.56□□□□□ -0.56
RBM39-236ENST00000490484 CSPP1Q1MSJ5 1256 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 LONRF3Q496Y0 759 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 LRRC55Q6ZSA7 311 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 ZNF598Q86UK7 904 aaKnown RBP11.56□□□□□ -0.56
RBM39-236ENST00000490484 EXOC8Q8IYI6 725 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 PRPF31Q8WWY3 499 aaKnown RBP11.56□□□□□ -0.56
RBM39-236ENST00000490484 PPP2R3CQ969Q6 453 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 ZSCAN31Q96LW9 406 aaPredicted RBP11.56□□□□□ -0.56
RBM39-236ENST00000490484 CCDC43Q96MW1 224 aaKnown RBP11.56□□□□□ -0.56
RBM39-236ENST00000490484 MTMR9Q96QG7 549 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 INO80BQ9C086 356 aaPredicted RBP11.56□□□□□ -0.56
RBM39-236ENST00000490484 IFT122Q9HBG6 1241 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 TLR9Q9NR96 1032 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 CHST12Q9NRB3 414 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 AGPAT5Q9NUQ2 364 aa11.56□□□□□ -0.56
RBM39-236ENST00000490484 GRXCR2A6NFK2 248 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 NCK2O43639 380 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 GAS2O43903 313 aaKnown RBP11.55□□□□□ -0.56
RBM39-236ENST00000490484 LTBRP36941 435 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 PHKA2P46019 1235 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 NRIP1P48552 1158 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 NDUFV1P49821 464 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 UBE3AQ05086 875 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 LAMTOR4Q0VGL1 99 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 CTC1Q2NKJ3 1217 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 PUS10Q3MIT2 529 aaKnown RBP11.55□□□□□ -0.56
RBM39-236ENST00000490484 RBM23Q86U06 439 aaKnown RBP11.55□□□□□ -0.56
RBM39-236ENST00000490484 FERMT3Q86UX7 667 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 RNF149Q8NC42 400 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 MICAL1Q8TDZ2 1067 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 TCP11Q8WWU5 503 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 LPPQ93052 612 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 ZNF558Q96NG5 402 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 HSD17B14Q9BPX1 270 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 MRPL9Q9BYD2 267 aaKnown RBP11.55□□□□□ -0.56
RBM39-236ENST00000490484 FOXP1Q9H334 677 aaPredicted RBP11.55□□□□□ -0.56
RBM39-236ENST00000490484 MINDY3Q9H8M7 445 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 XPNPEP1Q9NQW7 623 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 FAM105AQ9NUU6 356 aa11.55□□□□□ -0.56
RBM39-236ENST00000490484 MEIS3P2A8K0S8 358 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 ERLIN2O94905 339 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 LYPLA2O95372 231 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 EOMESO95936 686 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 OR52Z1P0C646 297 aa11.54□□□□□ -0.56
RBM39-236ENST00000490484 SSTR3P32745 418 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms