RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 VMACQ2NL98 169 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 CCDC178Q5BJE1 867 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 Q6ZUG5 572 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 KCNK18Q7Z418 384 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 PNMA8AQ86V59 439 aaPredicted RBP5.26□□□□□ -1.57
CD46-216ENST00000490278 SLC41A1Q8IVJ1 513 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 REXO1L1PQ8IX06 675 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 TP53I13Q8NBR0 393 aaPredicted RBP5.26□□□□□ -1.57
CD46-216ENST00000490278 TXNDC5Q8NBS9 432 aaKnown RBP5.26□□□□□ -1.57
CD46-216ENST00000490278 ADAMTS17Q8TE56 1095 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 SSH1Q8WYL5 1049 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 AJUBAQ96IF1 538 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 KATNBL1Q9H079 304 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 BARX1Q9HBU1 254 aaPredicted RBP5.26□□□□□ -1.57
CD46-216ENST00000490278 AASDHPPTQ9NRN7 309 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 POLR3BQ9NW08 1133 aaPredicted RBP5.26□□□□□ -1.57
CD46-216ENST00000490278 DPP7Q9UHL4 492 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 MAGEL2Q9UJ55 1249 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 G3BP2Q9UN86 482 aaKnown RBP5.26□□□□□ -1.57
CD46-216ENST00000490278 CDY2AQ9Y6F7 541 aa5.26□□□□□ -1.57
CD46-216ENST00000490278 C9orf118A6NHY6 69 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 XPOTO43592 962 aaKnown RBP5.25□□□□□ -1.57
CD46-216ENST00000490278 PCDHGA12O60330 932 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 NRP2O60462 931 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 SNUPNO95149 360 aaKnown RBP5.25□□□□□ -1.57
CD46-216ENST00000490278 CELA3BP08861 270 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 AGXTP21549 392 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 STAT5BP51692 787 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 SLC5A3P53794 718 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 ACAP2Q15057 778 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 MUM1Q2TAK8 710 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 ZNF761Q86XN6 746 aaPredicted RBP5.25□□□□□ -1.57
CD46-216ENST00000490278 KLHL36Q8N4N3 616 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 HOOK2Q96ED9 719 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 TOX2Q96NM4 488 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 PCDHGA9Q9Y5G4 932 aaKnown RBP5.25□□□□□ -1.57
CD46-216ENST00000490278 PCDHGA8Q9Y5G5 932 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 PCDHGA7Q9Y5G6 932 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 PCDHGA6Q9Y5G7 932 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 PCDHGA3Q9Y5H0 932 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 PCDHGA2Q9Y5H1 932 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 GPR45Q9Y5Y3 372 aa5.25□□□□□ -1.57
CD46-216ENST00000490278 E2F8A0AVK6 867 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 OSMP13725 252 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 MEOX1P50221 254 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 RAB27AP51159 221 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 SLURP1P55000 103 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 NRG3P56975 720 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 SESN2P58004 480 aaPredicted RBP5.24□□□□□ -1.57
CD46-216ENST00000490278 CDK17Q00537 523 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 TRIM68Q6AZZ1 485 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 RTKN2Q8IZC4 609 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 LCORQ96JN0 433 aaPredicted RBP5.24□□□□□ -1.57
CD46-216ENST00000490278 WDR92Q96MX6 357 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 CARD11Q9BXL7 1154 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 OSBPL6Q9BZF3 934 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 IFT122Q9HBG6 1241 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 ZNF277Q9NRM2 450 aaPredicted RBP5.24□□□□□ -1.57
CD46-216ENST00000490278 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.24□□□□□ -1.57
CD46-216ENST00000490278 TCEAL9Q9UHQ7 104 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 EVLQ9UI08 416 aaPredicted RBP5.24□□□□□ -1.57
CD46-216ENST00000490278 DNAI1Q9UI46 699 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 ADAM29Q9UKF5 820 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 INVSQ9Y283 1065 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 VWA7Q9Y334 891 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 LUC7L2Q9Y383 392 aaKnown RBP5.24□□□□□ -1.57
CD46-216ENST00000490278 EID1Q9Y6B2 187 aa5.24□□□□□ -1.57
CD46-216ENST00000490278 A0A0A6YYK5 440 aaPredicted RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 AKAP10O43572 662 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 SEC24DO94855 1032 aaPredicted RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 CFPP27918 469 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 CSF2RBP32927 897 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 RECQLP46063 649 aaPredicted RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 PIN1Q13526 163 aaPredicted RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 USP10Q14694 798 aaKnown RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 PCOLCEQ15113 449 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 MAN2A1Q16706 1144 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 ANO4Q32M45 955 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 EFCAB2Q5VUJ9 269 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 KLHDC10Q6PID8 442 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 LMBR1LQ6UX01 489 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 LARP4Q71RC2 724 aaKnown RBP eCLIP5.23□□□□□ -1.57
CD46-216ENST00000490278 GAREM2Q75VX8 874 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 GLB1L2Q8IW92 636 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 RAVER1Q8IY67 606 aaKnown RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 LRRC56Q8IYG6 542 aaPredicted RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 TSPEARQ8WU66 669 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 JADE3Q92613 823 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 NKD2Q969F2 451 aaPredicted RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 GFM2Q969S9 779 aaKnown RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 TEKT5Q96M29 485 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 FDXACB1Q9BRP7 624 aaPredicted RBP5.23□□□□□ -1.57
CD46-216ENST00000490278 SOX7Q9BT81 388 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 ZDHHC9Q9Y397 364 aa5.23□□□□□ -1.57
CD46-216ENST00000490278 MROH6A6NGR9 719 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 DBX1A6NMT0 343 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 ABLIM3O94929 683 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 FSBPO95073 299 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 KCNC1P48547 511 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 MRE11P49959 708 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms