RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FDXACB1Q9BRP7 624 aaPredicted RBP13.27□□□□□ -0.29
SRSF4-204ENST00000489898 A0A0U1RQF3 1178 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 POTEMA6NI47 508 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 C19orf67A6NJJ6 358 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 SLITRK3O94933 977 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 SPATA31C1P0DKV0 1188 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 AFF1P51825 1210 aaKnown RBP13.26□□□□□ -0.29
SRSF4-204ENST00000489898 ERVFC1P60507 584 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 ZP2Q05996 745 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 EPHA7Q15375 998 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 AMHR2Q16671 573 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 ZNF410Q86VK4 478 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 FEZF2Q8TBJ5 459 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 POF1BQ8WVV4 589 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 MAP7D2Q96T17 732 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 VN1R3Q9BXE9 311 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 AGPAT5Q9NUQ2 364 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 TYW1Q9NV66 732 aaKnown RBP13.26□□□□□ -0.29
SRSF4-204ENST00000489898 RAPGEFL1Q9UHV5 662 aa13.26□□□□□ -0.29
SRSF4-204ENST00000489898 DOCK6Q96HP0 2047 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 DENND3A2RUS2 1198 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 TBKBP1A7MCY6 615 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 CSPG5O95196 566 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 EDN1P05305 212 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 P4HBP07237 508 aaKnown RBP13.25□□□□□ -0.29
SRSF4-204ENST00000489898 STAG3L1P0CL83 205 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 HOXA11P31270 313 aaPredicted RBP13.25□□□□□ -0.29
SRSF4-204ENST00000489898 CYP4A11Q02928 519 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 ADAM15Q13444 863 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 CTTNQ14247 550 aaKnown RBP13.25□□□□□ -0.29
SRSF4-204ENST00000489898 EMC2Q15006 297 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 PTPROQ16827 1216 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 AAK1Q2M2I8 961 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 NAALADL2Q58DX5 795 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
SRSF4-204ENST00000489898 CCDC83Q8IWF9 413 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 C4orf32Q8N8J7 132 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 TMEM117Q9H0C3 514 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 EPHX3Q9H6B9 360 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 NRBP2Q9NSY0 501 aa13.25□□□□□ -0.29
SRSF4-204ENST00000489898 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
SRSF4-204ENST00000489898 MBTPS2O43462 519 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 FGF18O76093 207 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 EFEMP2O95967 443 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
SRSF4-204ENST00000489898 PHKA2P46019 1235 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 GUCY1B3Q02153 619 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 NCAPH2Q6IBW4 605 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 PTCRAQ6ISU1 281 aaPredicted RBP13.24□□□□□ -0.29
SRSF4-204ENST00000489898 SLC39A11Q8N1S5 342 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 SMRP1Q8NCR6 262 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 ASAP3Q8TDY4 903 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 LPPQ93052 612 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 TMEM143Q96AN5 459 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 EIF2AK1Q9BQI3 630 aaKnown RBP13.24□□□□□ -0.29
SRSF4-204ENST00000489898 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
SRSF4-204ENST00000489898 TCEAL9Q9UHQ7 104 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 COL4A3BPQ9Y5P4 624 aa13.24□□□□□ -0.29
SRSF4-204ENST00000489898 NOTCH4Q99466 2003 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 DDX11L8A8MPP1 907 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 NEMFO60524 1076 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 MED24O75448 989 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 EYA4O95677 639 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 RARRES1P49788 294 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 TOB1P50616 345 aaPredicted RBP13.23□□□□□ -0.29
SRSF4-204ENST00000489898 PLCB3Q01970 1234 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 CAPSQ13938 189 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 NBR1Q14596 966 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 SMAD2Q15796 467 aaKnown RBP13.23□□□□□ -0.29
SRSF4-204ENST00000489898 AGMOQ6ZNB7 445 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 ZNF710Q8N1W2 664 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 EFHBQ8N7U6 833 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 FBXO18Q8NFZ0 1043 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
SRSF4-204ENST00000489898 NLRP7Q8WX94 980 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 WASF1Q92558 559 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 CLDND1Q9NY35 253 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 LIMCH1Q9UPQ0 1083 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 PPME1Q9Y570 386 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 PCDHB7Q9Y5E2 793 aa13.23□□□□□ -0.29
SRSF4-204ENST00000489898 HIDE1A8MVS5 230 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 INPPL1O15357 1258 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 ZNF623O75123 536 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 TMOD1P28289 359 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 MBTD1Q05BQ5 628 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 LAMTOR4Q0VGL1 99 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 CALCRLQ16602 461 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 ECM1Q16610 540 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 DUSP6Q16828 381 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 SLFN12Q8IYM2 578 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 SMG8Q8ND04 991 aaKnown RBP13.22□□□□□ -0.29
SRSF4-204ENST00000489898 NLRP4Q96MN2 994 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 LLPHQ9BRT6 129 aaKnown RBP13.22□□□□□ -0.29
SRSF4-204ENST00000489898 TTC12Q9H892 705 aaPredicted RBP13.22□□□□□ -0.29
SRSF4-204ENST00000489898 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms