RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 WDR92Q96MX6 357 aa7.3□□□□□ -1.24
CCDC39-206ENST00000489868 AGO3Q9H9G7 860 aaKnown RBP7.3□□□□□ -1.24
CCDC39-206ENST00000489868 PCDHB6Q9Y5E3 794 aa7.3□□□□□ -1.24
CCDC39-206ENST00000489868 K7ESM1 405 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 FOXS1O43638 330 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 ADAM8P78325 824 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 ATP2C1P98194 919 aaPredicted RBP7.29□□□□□ -1.24
CCDC39-206ENST00000489868 ICAM4Q14773 271 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 ZNF568Q3ZCX4 644 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 CT83Q5H943 113 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 RNF187Q5TA31 235 aaPredicted RBP7.29□□□□□ -1.24
CCDC39-206ENST00000489868 TCTN3Q6NUS6 607 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 GLB1LQ6UWU2 654 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 CLEC14AQ86T13 490 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 GPR135Q8IZ08 494 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 PPP1R14CQ8TAE6 165 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 WWC2-AS2Q96NR7 200 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 USP18Q9UMW8 372 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 NUMBLQ9Y6R0 609 aa7.29□□□□□ -1.24
CCDC39-206ENST00000489868 ST20-MTHFSA0A0A6YYL1 179 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 PATE3B3GLJ2 98 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 LPLP06858 475 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 CR2P20023 1033 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 CDKN1CP49918 316 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-206ENST00000489868 ADCY7P51828 1080 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 EFEMP1Q12805 493 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 GAREM2Q75VX8 874 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 CIR1Q86X95 450 aaPredicted RBP7.28□□□□□ -1.24
CCDC39-206ENST00000489868 CDYL2Q8N8U2 506 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 ATL2Q8NHH9 583 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 TRIM8Q9BZR9 551 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 TMX1Q9H3N1 280 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 CD248Q9HCU0 757 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 PRSS50Q9UI38 385 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 ST6GALNAC2Q9UJ37 374 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 EDARQ9UNE0 448 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 ATP8A1Q9Y2Q0 1164 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 RBM8AQ9Y5S9 174 aaKnown RBP7.28□□□□□ -1.24
CCDC39-206ENST00000489868 PHLDB1Q86UU1 1377 aa7.28□□□□□ -1.24
CCDC39-206ENST00000489868 B8ZZF3 427 aa7.27□□□□□ -1.25
CCDC39-206ENST00000489868 CDC14BO60729 498 aa7.27□□□□□ -1.25
CCDC39-206ENST00000489868 SEC24DO94855 1032 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-206ENST00000489868 CD69Q07108 199 aa7.27□□□□□ -1.25
CCDC39-206ENST00000489868 IQSEC1Q6DN90 963 aa7.27□□□□□ -1.25
CCDC39-206ENST00000489868 SPATS2Q86XZ4 545 aaKnown RBP7.27□□□□□ -1.25
CCDC39-206ENST00000489868 LMBR1Q8WVP7 490 aa7.27□□□□□ -1.25
CCDC39-206ENST00000489868 GFM2Q969S9 779 aaKnown RBP7.27□□□□□ -1.25
CCDC39-206ENST00000489868 EAF2Q96CJ1 260 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-206ENST00000489868 GPHA2Q96T91 129 aa7.27□□□□□ -1.25
CCDC39-206ENST00000489868 PLA2G12BQ9BX93 195 aa7.27□□□□□ -1.25
CCDC39-206ENST00000489868 PUF60Q9UHX1 559 aaKnown RBP7.27□□□□□ -1.25
CCDC39-206ENST00000489868 EVLQ9UI08 416 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-206ENST00000489868 NCANO14594 1321 aa7.27□□□□□ -1.25
CCDC39-206ENST00000489868 SLC26A4O43511 780 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 H2AFYO75367 372 aaKnown RBP7.26□□□□□ -1.25
CCDC39-206ENST00000489868 GAAP10253 952 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 BUD31P41223 144 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-206ENST00000489868 ERVK-21P61565 698 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 PPARAQ07869 468 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 TCIRG1Q13488 830 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 RNF219Q5W0B1 726 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-206ENST00000489868 FUKQ8N0W3 1084 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 FAM177A1Q8N128 213 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-206ENST00000489868 PIK3C3Q8NEB9 887 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 TGFBRAP1Q8WUH2 860 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 GAB3Q8WWW8 586 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 SLC7A6OSQ96CW6 309 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-206ENST00000489868 LOXL4Q96JB6 756 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 HIST1H2AHQ96KK5 128 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 SAMD11Q96NU1 681 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 HIST1H2AJQ99878 128 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 OSBPL6Q9BZF3 934 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 KCTD10Q9H3F6 313 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 C12orf65Q9H3J6 166 aaKnown RBP7.26□□□□□ -1.25
CCDC39-206ENST00000489868 C14orf119Q9NWQ9 140 aa7.26□□□□□ -1.25
CCDC39-206ENST00000489868 CNOT11Q9UKZ1 510 aaKnown RBP7.26□□□□□ -1.25
CCDC39-206ENST00000489868 PRRG2O14669 202 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 TOX4O94842 621 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 CPEP16870 476 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 ENPP1P22413 925 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 SCAND1P57086 179 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 SESN2P58004 480 aaPredicted RBP7.25□□□□□ -1.25
CCDC39-206ENST00000489868 FSCN1Q16658 493 aaKnown RBP7.25□□□□□ -1.25
CCDC39-206ENST00000489868 ANKRD53Q8N9V6 530 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 PLA2G15Q8NCC3 412 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 GIMAP8Q8ND71 665 aaPredicted RBP7.25□□□□□ -1.25
CCDC39-206ENST00000489868 Q8TCH9 128 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 GCDHQ92947 438 aaPredicted RBP7.25□□□□□ -1.25
CCDC39-206ENST00000489868 RPL10LQ96L21 214 aaKnown RBP7.25□□□□□ -1.25
CCDC39-206ENST00000489868 C8orf49Q96NF6 230 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 WNT8AQ9H1J5 351 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 SLC6A15Q9H2J7 730 aa7.25□□□□□ -1.25
CCDC39-206ENST00000489868 ZFR2Q9UPR6 939 aaKnown RBP7.25□□□□□ -1.25
CCDC39-206ENST00000489868 LY86O95711 162 aa7.24□□□□□ -1.25
CCDC39-206ENST00000489868 LGALS4P56470 323 aa7.24□□□□□ -1.25
CCDC39-206ENST00000489868 BPIFB4P59827 614 aa7.24□□□□□ -1.25
CCDC39-206ENST00000489868 RIN1Q13671 783 aa7.24□□□□□ -1.25
CCDC39-206ENST00000489868 ERICH6BQ5W0A0 696 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms