RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 C2orf27AQ580R0 203 aa4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 ZC3H12BQ5HYM0 836 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 KRT26Q7Z3Y9 468 aa4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 FGD2Q7Z6J4 655 aa4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 NOSTRINQ8IVI9 506 aa4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 JMYQ8N9B5 988 aa4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 GIMAP8Q8ND71 665 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 LARP4BQ92615 738 aaKnown RBP4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 EXTL1Q92935 676 aa4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 MAGEB10Q96LZ2 347 aaPredicted RBP4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 ARNT2Q9HBZ2 717 aa4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 TCEAL9Q9UHQ7 104 aa4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 CDC42EP3Q9UKI2 254 aa4.13□□□□□ -1.75
DEPDC1-204ENST00000489862 WASHC2CQ9Y4E1 1318 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 MASP2O00187 686 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 KATNA1O75449 491 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 KCNA6P17658 529 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 RAB27AP51159 221 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 HERVK_113P62684 666 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 DHX8Q14562 1220 aaKnown RBP4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 TBR1Q16650 682 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 TRIM61Q5EBN2 209 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 C10orf62Q5T681 223 aaPredicted RBP4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 PAPD7Q5XG87 772 aaKnown RBP4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 ABHD17CQ6PCB6 329 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 PCSK4Q6UW60 755 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 LHFPL2Q6ZUX7 228 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 LARP4Q71RC2 724 aaKnown RBP eCLIP4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 OVCH1Q7RTY7 1134 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 BRAPQ7Z569 592 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 EDAQ92838 391 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 WNK4Q96J92 1243 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 ZDHHC5Q9C0B5 715 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 SFMBT1Q9UHJ3 866 aa4.12□□□□□ -1.75
DEPDC1-204ENST00000489862 A0A0A6YYK5 440 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 RASSF10A6NK89 507 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 CNGA1P29973 690 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 STAT3P40763 770 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 ECE1P42892 770 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 ETV4P43268 484 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 RAC3P60763 192 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 CD83Q01151 205 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 STILQ15468 1287 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 ZNF568Q3ZCX4 644 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 LONRF3Q496Y0 759 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 OTOP2Q7RTS6 562 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 STRA8Q7Z7C7 330 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 FAM9BQ8IZU0 186 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 ZSWIM2Q8NEG5 633 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 ZNF483Q8TF39 744 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 THAP3Q8WTV1 239 aaPredicted RBP4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 ASB15Q8WXK1 588 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 DPYSL5Q9BPU6 564 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 BTBD2Q9BX70 525 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 CELF4Q9BZC1 486 aaKnown RBP4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 KIAA1683Q9H0B3 1180 aa4.11□□□□□ -1.75
DEPDC1-204ENST00000489862 TCRBV16S1A1N1A0A5B0 115 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 PRAMEF22A3QJZ6 481 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 MATN2O00339 956 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 MAFGO15525 162 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 WDHD1O75717 1129 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 HMGCRP04035 888 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 MYCLP1P12525 358 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 C21orf58P58505 322 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 TMEM132BQ14DG7 1078 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 PPP2R5AQ15172 486 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 ZMAT1Q5H9K5 638 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 KANK2Q63ZY3 851 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 SYCE2Q6PIF2 218 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 MICALCLQ6ZW33 695 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 CXXC5Q7LFL8 322 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 RNF180Q86T96 592 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 FUKQ8N0W3 1084 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 IGSF22Q8N9C0 903 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 HIPK4Q8NE63 616 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 NTN5Q8WTR8 489 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 SCYL1Q96KG9 808 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 GBP4Q96PP9 640 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 PLEKHG4BQ96PX9 1271 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 ASPSCR1Q9BZE9 553 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 CCDC8Q9H0W5 538 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 MMRN2Q9H8L6 949 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 KCNH7Q9NS40 1196 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 OAZ3Q9UMX2 235 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 NR2E1Q9Y466 385 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 SLC12A8A0AV02 714 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 FAM83GA6ND36 823 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 FOXP2O15409 715 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 CDC14BO60729 498 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 CR2P20023 1033 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 MOGSQ13724 837 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 TUBA3CQ13748 450 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 EIF4HQ15056 248 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 TUBA3EQ6PEY2 450 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 C1orf210Q8IVY1 113 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 DLG3Q92796 817 aa4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 RTFDC1Q9BY42 306 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 MRPL4Q9BYD3 311 aaKnown RBP4.1□□□□□ -1.75
DEPDC1-204ENST00000489862 OR10A5Q9H207 317 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms