RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 EYSQ5T1H1 3165 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 PRUNE2Q8WUY3 3088 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 POTEMA6NI47 508 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 H3BQV1 296 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 GRM6O15303 877 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 DGAT1O75907 488 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 EOMESO95936 686 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 FGFR1P11362 822 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 TWF2Q6IBS0 349 aaKnown RBP19.88■□□□□ 0.77
ABCF3-217ENST00000489719 SRGAP1Q7Z6B7 1085 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 PIGOQ8TEQ8 1089 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 TMEM117Q9H0C3 514 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 TUFT1Q9NNX1 390 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 ALG13Q9NP73 1137 aaKnown RBP19.88■□□□□ 0.77
ABCF3-217ENST00000489719 TYW1Q9NV66 732 aaKnown RBP19.88■□□□□ 0.77
ABCF3-217ENST00000489719 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.88■□□□□ 0.77
ABCF3-217ENST00000489719 TTC3P53804 2025 aa19.88■□□□□ 0.77
ABCF3-217ENST00000489719 EVPLQ92817 2033 aa19.87■□□□□ 0.77
ABCF3-217ENST00000489719 SKIP12755 728 aa19.87■□□□□ 0.77
ABCF3-217ENST00000489719 GJB2P29033 226 aa19.87■□□□□ 0.77
ABCF3-217ENST00000489719 MXD4Q14582 209 aaPredicted RBP19.87■□□□□ 0.77
ABCF3-217ENST00000489719 FERMT3Q86UX7 667 aa19.87■□□□□ 0.77
ABCF3-217ENST00000489719 KLHL23Q8NBE8 558 aa19.87■□□□□ 0.77
ABCF3-217ENST00000489719 NACC1Q96RE7 527 aa19.87■□□□□ 0.77
ABCF3-217ENST00000489719 POLR3CQ9BUI4 534 aaPredicted RBP19.87■□□□□ 0.77
ABCF3-217ENST00000489719 NSUN3Q9H649 340 aaKnown RBP19.87■□□□□ 0.77
ABCF3-217ENST00000489719 IFT122Q9HBG6 1241 aa19.87■□□□□ 0.77
ABCF3-217ENST00000489719 SMC3Q9UQE7 1217 aa19.87■□□□□ 0.77
ABCF3-217ENST00000489719 PIN4Q9Y237 131 aaKnown RBP19.87■□□□□ 0.77
ABCF3-217ENST00000489719 PRRC2BQ5JSZ5 2229 aaKnown RBP19.87■□□□□ 0.77
ABCF3-217ENST00000489719 A0A087WWV3 80 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 CD2BP2O95400 341 aaKnown RBP19.86■□□□□ 0.77
ABCF3-217ENST00000489719 TFDP1Q14186 410 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 TCEAL5Q5H9L2 206 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 CATSPER3Q86XQ3 398 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 RNF149Q8NC42 400 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 SPPL3Q8TCT6 385 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 COL4A6Q14031 1691 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 TRANK1O15050 2925 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 SIP14410 1827 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 UNC80Q8N2C7 3258 aa19.86■□□□□ 0.77
ABCF3-217ENST00000489719 NCK2O43639 380 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 SPATA31C1P0DKV0 1188 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 BMP1P13497 986 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 PHKA2P46019 1235 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 RARRES1P49788 294 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 NCBP1Q09161 790 aaKnown RBP19.85■□□□□ 0.77
ABCF3-217ENST00000489719 CSPP1Q1MSJ5 1256 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 C4orf32Q8N8J7 132 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 CASD1Q96PB1 797 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 RAB34Q9BZG1 259 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 STK24Q9Y6E0 443 aa19.85■□□□□ 0.77
ABCF3-217ENST00000489719 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.84■□□□□ 0.77
ABCF3-217ENST00000489719 MED24O75448 989 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 ITGB1P05556 798 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 LAG3P18627 525 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 RPA1P27694 616 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 TOB1P50616 345 aaPredicted RBP19.84■□□□□ 0.77
ABCF3-217ENST00000489719 PTGDRQ13258 359 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 PDIA5Q14554 519 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 NBR1Q14596 966 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 EP400NLQ6ZTU2 488 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 THNSL1Q8IYQ7 743 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 ADAMTS19Q8TE59 1207 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 PPP2R3CQ969Q6 453 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 TRAIPQ9BWF2 469 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 UBE2ZQ9H832 354 aaPredicted RBP19.84■□□□□ 0.77
ABCF3-217ENST00000489719 XPNPEP1Q9NQW7 623 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 LRWD1Q9UFC0 647 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 DBR1Q9UK59 544 aaKnown RBP19.84■□□□□ 0.77
ABCF3-217ENST00000489719 PCDHB6Q9Y5E3 794 aa19.84■□□□□ 0.77
ABCF3-217ENST00000489719 CSPG5O95196 566 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 ARL2P36404 184 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 FXR2P51116 673 aaKnown RBP eCLIP19.83■□□□□ 0.77
ABCF3-217ENST00000489719 KCNQ1P51787 676 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 POU5F1BQ06416 359 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 LARP1BQ659C4 914 aaKnown RBP19.83■□□□□ 0.77
ABCF3-217ENST00000489719 HAUS3Q68CZ6 603 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 ZNF598Q86UK7 904 aaKnown RBP19.83■□□□□ 0.77
ABCF3-217ENST00000489719 MICAL1Q8TDZ2 1067 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 POF1BQ8WVV4 589 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 PGBD4Q96DM1 585 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 BACH2Q9BYV9 841 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 CWH43Q9H720 699 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 FAM105AQ9NUU6 356 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 RNF19AQ9NV58 838 aa19.83■□□□□ 0.77
ABCF3-217ENST00000489719 LAD1O00515 517 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 USO1O60763 962 aaKnown RBP19.82■□□□□ 0.76
ABCF3-217ENST00000489719 ZNF623O75123 536 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 ERLIN2O94905 339 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 MUTP22033 750 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 KCNA5P22460 613 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 CCT6AP40227 531 aaKnown RBP19.82■□□□□ 0.76
ABCF3-217ENST00000489719 RAB27AP51159 221 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 PTENP60484 403 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 UBE3AQ05086 875 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 PCBP1Q15365 356 aaKnown RBP eCLIP19.82■□□□□ 0.76
ABCF3-217ENST00000489719 RILPL1Q5EBL4 403 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 MAEAQ7L5Y9 396 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 LRRC43Q8N309 656 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms