RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 RNF207Q6ZRF8 634 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 DAW1Q8N136 415 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 ZKSCAN4Q969J2 545 aaPredicted RBP16.28■□□□□ 0.2
COL9A1-208ENST00000489611 WRNIP1Q96S55 665 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 SENP7Q9BQF6 1050 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 SELENOOQ9BVL4 669 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 C17orf75Q9HAS0 396 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 EXOC7Q9UPT5 735 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 PPP2R3BQ9Y5P8 575 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 PARP14Q460N5 1801 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 F8VZ95 297 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 ZBTB39O15060 712 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 STAM2O75886 525 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 YWHABP31946 246 aaKnown RBP16.27■□□□□ 0.2
COL9A1-208ENST00000489611 EPHB4P54760 987 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 RPS6P62753 249 aaKnown RBP16.27■□□□□ 0.2
COL9A1-208ENST00000489611 GTF2BQ00403 316 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 MYL7Q01449 175 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 APBA1Q02410 837 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 ITGB3BPQ13352 177 aaPredicted RBP16.27■□□□□ 0.2
COL9A1-208ENST00000489611 TAF3Q5VWG9 929 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 CPXCR1Q8N123 301 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 EIF1ADQ8N9N8 165 aaKnown RBP16.27■□□□□ 0.2
COL9A1-208ENST00000489611 GPRASP2Q96D09 838 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 RAVER2Q9HCJ3 691 aaKnown RBP16.27■□□□□ 0.2
COL9A1-208ENST00000489611 KCNG1Q9UIX4 513 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 PRDM4Q9UKN5 801 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 SSC5DA1L4H1 1573 aa16.27■□□□□ 0.2
COL9A1-208ENST00000489611 CYP2J2P51589 502 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 NNTQ13423 1086 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 RPS6KA1Q15418 735 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 CLUL1Q15846 466 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 ZNF746Q6NUN9 644 aaPredicted RBP16.27■□□□□ 0.19
COL9A1-208ENST00000489611 SULF1Q8IWU6 871 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 IFT20Q8IY31 132 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 CDHR1Q96JP9 859 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 TRERF1Q96PN7 1200 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 RMDN3Q96TC7 470 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 PXMP2Q9NR77 195 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 ZNF112Q9UJU3 913 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 USP20Q9Y2K6 914 aa16.27■□□□□ 0.19
COL9A1-208ENST00000489611 C19orf81C9J6K1 198 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 VWA5AO00534 786 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 SCP2P22307 547 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 CCND2P30279 289 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 TNNT3P45378 269 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-208ENST00000489611 SMTNP53814 917 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 BACE1P56817 501 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 TNNC1P63316 161 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 ENPEPQ07075 957 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 DGKZQ13574 1117 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 USP50Q70EL3 339 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-208ENST00000489611 OTUD6AQ7L8S5 288 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 SCYL3Q8IZE3 742 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 GOLGA6L1Q8N7Z2 621 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 XXYLT1Q8NBI6 393 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 AENQ8WTP8 325 aaKnown RBP16.26■□□□□ 0.19
COL9A1-208ENST00000489611 C12orf42Q96LP6 360 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 INTS2Q9H0H0 1204 aaKnown RBP16.26■□□□□ 0.19
COL9A1-208ENST00000489611 RPAP3Q9H6T3 665 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-208ENST00000489611 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-208ENST00000489611 DNAJC12Q9UKB3 198 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 ADAM21Q9UKJ8 722 aa16.26■□□□□ 0.19
COL9A1-208ENST00000489611 DIS3Q9Y2L1 958 aaKnown RBP16.26■□□□□ 0.19
COL9A1-208ENST00000489611 ZC3H4Q9UPT8 1303 aaKnown RBP16.26■□□□□ 0.19
COL9A1-208ENST00000489611 LRRIQ3A6PVS8 624 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-208ENST00000489611 EVI5O60447 810 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 MTMR2Q13614 643 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 SUPT20HL1Q3ZLR7 823 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 EAPPQ56P03 285 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-208ENST00000489611 MUM1L1Q5H9M0 696 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 ARHGEF16Q5VV41 709 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 SLFN11Q7Z7L1 901 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 USP37Q86T82 979 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 IL31RAQ8NI17 732 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 SLC30A5Q8TAD4 765 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 CCDC102AQ96A19 550 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 LRRC1Q9BTT6 524 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 HPCAL4Q9UM19 191 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 H3BQF6 201 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 DDX39AO00148 427 aaKnown RBP16.25■□□□□ 0.19
COL9A1-208ENST00000489611 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 CXCR5P32302 372 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 NOP2P46087 812 aaKnown RBP16.25■□□□□ 0.19
COL9A1-208ENST00000489611 NCKAP1LP55160 1127 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 DRAP1Q14919 205 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-208ENST00000489611 ENOX2Q16206 610 aaKnown RBP16.25■□□□□ 0.19
COL9A1-208ENST00000489611 SLC30A10Q6XR72 485 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 HAUS6Q7Z4H7 955 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 LRRC57Q8N9N7 239 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 ACTRT1Q8TDG2 376 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 CAVIN3Q969G5 261 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 INPP4AQ96PE3 977 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-208ENST00000489611 TAAR1Q96RJ0 339 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 TAF1DQ9H5J8 278 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-208ENST00000489611 PICK1Q9NRD5 415 aa16.25■□□□□ 0.19
COL9A1-208ENST00000489611 SUCLA2Q9P2R7 463 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms