RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 FBXO2Q9UK22 296 aaPredicted RBP13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 KIAA1671Q9BY89 1806 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 NLRC5Q86WI3 1866 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 TMEM265A0A087WTH1 108 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 RFXAPO00287 272 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 GAS2O43903 313 aaKnown RBP13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 BMP15O95972 392 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 F13A1P00488 732 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 ARL2P36404 184 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 HTRA4P83105 476 aaPredicted RBP13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 PAN2Q504Q3 1202 aaKnown RBP13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 FAM102BQ5T8I3 360 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 USP49Q70CQ1 688 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 CATSPER4Q7RTX7 472 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 ARNTL2Q8WYA1 636 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 CHAMP1Q96JM3 812 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 RAD9AQ99638 391 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 RUSC1Q9BVN2 902 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 CSRNP2Q9H175 543 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 ZSCAN16Q9H4T2 348 aaPredicted RBP13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 TFIP11Q9UBB9 837 aaKnown RBP13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 DAXXQ9UER7 740 aaPredicted RBP13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 CHD7Q9P2D1 2997 aa13.63□□□□□ -0.23
SMARCD3-213ENST00000489503 LINC01553A4QN01 128 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 EYA4O95677 639 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 SSBP05455 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 XRCC6P12956 609 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 MUTP22033 750 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 SFPQP23246 707 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 SARSP49591 514 aaKnown RBP13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 KARSQ15046 597 aaKnown RBP13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 TMEM119Q4V9L6 283 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 NPAS4Q8IUM7 802 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 EXOC8Q8IYI6 725 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 CDK5RAP3Q96JB5 506 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 KIFC3Q9BVG8 833 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 RC3H2Q9HBD1 1191 aaKnown RBP13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 RGS18Q9NS28 235 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 PIN4Q9Y237 131 aaKnown RBP13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 ADGRA3Q8IWK6 1321 aa13.62□□□□□ -0.23
SMARCD3-213ENST00000489503 LRRIQ4A6NIV6 560 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 C9IYK1 514 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 FGFR1P11362 822 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 CYP11B2P19099 503 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 PLCG1P19174 1290 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 PHKA2P46019 1235 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 RAD51AP2Q09MP3 1159 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 STK38Q15208 465 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 LONRF3Q496Y0 759 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 ODR4Q5SWX8 454 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 HYIQ5T013 277 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 RNF169Q8NCN4 708 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 MCPH1Q8NEM0 835 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 RASSF8Q8NHQ8 419 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 GDPD5Q8WTR4 605 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 EPSTI1Q96J88 318 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 C17orf80Q9BSJ5 609 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 HCSTQ9UBK5 93 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 LRFN2Q9ULH4 789 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 DNM3Q9UQ16 869 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 ZDHHC9Q9Y397 364 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 INSL6Q9Y581 213 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 STK24Q9Y6E0 443 aa13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 FNDC1Q4ZHG4 1894 aaPredicted RBP13.61□□□□□ -0.23
SMARCD3-213ENST00000489503 NPHP3-ACAD11A0A0J9YXS1 232 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 INO80B-WBP1J3KQ70 363 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 FOSL2P15408 326 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 ATF7P17544 494 aaPredicted RBP13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 LONP1P36776 959 aaKnown RBP13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 UBA7P41226 1012 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 PTENP60484 403 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 MBTD1Q05BQ5 628 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 TFDP1Q14186 410 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 ADGRE1Q14246 886 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 DHX8Q14562 1220 aaKnown RBP13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 MXD4Q14582 209 aaPredicted RBP13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 TWF2Q6IBS0 349 aaKnown RBP13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 SLC24A5Q71RS6 500 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 CRIPAKQ8N1N5 446 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 ZNF710Q8N1W2 664 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 SYMPKQ92797 1274 aaKnown RBP13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 CPB2Q96IY4 423 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 AK8Q96MA6 479 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 INO80BQ9C086 356 aaPredicted RBP13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 C1orf112Q9NSG2 853 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 AGPAT5Q9NUQ2 364 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 RNF19AQ9NV58 838 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 CDH23Q9H251 3354 aa13.6□□□□□ -0.23
SMARCD3-213ENST00000489503 RALGAPA2Q2PPJ7 1873 aa13.59□□□□□ -0.23
SMARCD3-213ENST00000489503 ASAP2O43150 1006 aa13.59□□□□□ -0.23
SMARCD3-213ENST00000489503 B4GALT5O43286 388 aa13.59□□□□□ -0.23
SMARCD3-213ENST00000489503 TSPAN1O60635 241 aa13.59□□□□□ -0.23
SMARCD3-213ENST00000489503 HIP1RO75146 1068 aa13.59□□□□□ -0.23
SMARCD3-213ENST00000489503 DGKIO75912 1065 aa13.59□□□□□ -0.23
SMARCD3-213ENST00000489503 EDN1P05305 212 aa13.59□□□□□ -0.23
SMARCD3-213ENST00000489503 PLA2G4BP0C869 781 aa13.59□□□□□ -0.23
SMARCD3-213ENST00000489503 ZSCAN20P17040 1043 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms