RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 ZNF668Q96K58 619 aaPredicted RBP26.74■■□□□ 1.87
PTPN18-213ENST00000489215 LRWD1Q9UFC0 647 aa26.74■■□□□ 1.87
PTPN18-213ENST00000489215 RBAK-RBAKDNI3L0D1 243 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 ZBTB39O15060 712 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 EOMESO95936 686 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 SPATA31C1P0DKV0 1188 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 CTNNB1P35222 781 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 POU5F1BQ06416 359 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 LAMTOR4Q0VGL1 99 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 FERMT3Q86UX7 667 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 TMEM143Q96AN5 459 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 TRAIPQ9BWF2 469 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 PCDHB6Q9Y5E3 794 aa26.73■■□□□ 1.87
PTPN18-213ENST00000489215 A0A0U1RQF3 1178 aa26.72■■□□□ 1.87
PTPN18-213ENST00000489215 DTHD1Q6ZMT9 781 aa26.72■■□□□ 1.87
PTPN18-213ENST00000489215 CATSPER4Q7RTX7 472 aa26.72■■□□□ 1.87
PTPN18-213ENST00000489215 PIGOQ8TEQ8 1089 aa26.72■■□□□ 1.87
PTPN18-213ENST00000489215 ATXN2LQ8WWM7 1075 aaKnown RBP26.72■■□□□ 1.87
PTPN18-213ENST00000489215 P2RX5Q93086 422 aa26.72■■□□□ 1.87
PTPN18-213ENST00000489215 MRPL38Q96DV4 380 aaKnown RBP26.72■■□□□ 1.87
PTPN18-213ENST00000489215 LMAN2LQ9H0V9 348 aa26.72■■□□□ 1.87
PTPN18-213ENST00000489215 IFT122Q9HBG6 1241 aa26.72■■□□□ 1.87
PTPN18-213ENST00000489215 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.72■■□□□ 1.87
PTPN18-213ENST00000489215 AAASQ9NRG9 546 aa26.72■■□□□ 1.87
PTPN18-213ENST00000489215 COL4A4P53420 1690 aaPredicted RBP26.72■■□□□ 1.87
PTPN18-213ENST00000489215 PRRC2BQ5JSZ5 2229 aaKnown RBP26.71■■□□□ 1.87
PTPN18-213ENST00000489215 SRGAP2CP0DJJ0 459 aa26.71■■□□□ 1.87
PTPN18-213ENST00000489215 PHKA2P46019 1235 aa26.71■■□□□ 1.87
PTPN18-213ENST00000489215 NCBP1Q09161 790 aaKnown RBP26.71■■□□□ 1.87
PTPN18-213ENST00000489215 KSR1Q8IVT5 923 aa26.71■■□□□ 1.87
PTPN18-213ENST00000489215 MCPH1Q8NEM0 835 aa26.71■■□□□ 1.87
PTPN18-213ENST00000489215 INTS4Q96HW7 963 aaKnown RBP26.71■■□□□ 1.87
PTPN18-213ENST00000489215 THEGQ9P2T0 379 aa26.71■■□□□ 1.87
PTPN18-213ENST00000489215 MED24O75448 989 aa26.7■■□□□ 1.86
PTPN18-213ENST00000489215 SKIV2LQ15477 1246 aaKnown RBP26.7■■□□□ 1.86
PTPN18-213ENST00000489215 AAK1Q2M2I8 961 aa26.7■■□□□ 1.86
PTPN18-213ENST00000489215 BRAPQ7Z569 592 aa26.7■■□□□ 1.86
PTPN18-213ENST00000489215 ECHDC2Q86YB7 292 aa26.7■■□□□ 1.86
PTPN18-213ENST00000489215 ABI1Q8IZP0 508 aa26.7■■□□□ 1.86
PTPN18-213ENST00000489215 IGSF22Q8N9C0 903 aa26.7■■□□□ 1.86
PTPN18-213ENST00000489215 RNF149Q8NC42 400 aa26.7■■□□□ 1.86
PTPN18-213ENST00000489215 COG5Q9UP83 839 aa26.7■■□□□ 1.86
PTPN18-213ENST00000489215 TRANK1O15050 2925 aa26.7■■□□□ 1.86
PTPN18-213ENST00000489215 IBSPP21815 317 aaPredicted RBP26.69■■□□□ 1.86
PTPN18-213ENST00000489215 RAB27AP51159 221 aa26.69■■□□□ 1.86
PTPN18-213ENST00000489215 NBR1Q14596 966 aa26.69■■□□□ 1.86
PTPN18-213ENST00000489215 CSPP1Q1MSJ5 1256 aa26.69■■□□□ 1.86
PTPN18-213ENST00000489215 TMEM117Q9H0C3 514 aa26.69■■□□□ 1.86
PTPN18-213ENST00000489215 XPNPEP1Q9NQW7 623 aa26.69■■□□□ 1.86
PTPN18-213ENST00000489215 PCDHB12Q9Y5F1 795 aa26.69■■□□□ 1.86
PTPN18-213ENST00000489215 MRPL42Q9Y6G3 142 aaKnown RBP26.69■■□□□ 1.86
PTPN18-213ENST00000489215 FNDC1Q4ZHG4 1894 aaPredicted RBP26.68■■□□□ 1.86
PTPN18-213ENST00000489215 TBKBP1A7MCY6 615 aa26.68■■□□□ 1.86
PTPN18-213ENST00000489215 CSDE1O75534 798 aaKnown RBP26.68■■□□□ 1.86
PTPN18-213ENST00000489215 LINC00271P0C7V0 271 aa26.68■■□□□ 1.86
PTPN18-213ENST00000489215 FGFR4P22455 802 aa26.68■■□□□ 1.86
PTPN18-213ENST00000489215 CCT6AP40227 531 aaKnown RBP26.68■■□□□ 1.86
PTPN18-213ENST00000489215 PAN2Q504Q3 1202 aaKnown RBP26.68■■□□□ 1.86
PTPN18-213ENST00000489215 TIGD5Q53EQ6 642 aa26.68■■□□□ 1.86
PTPN18-213ENST00000489215 FAM102BQ5T8I3 360 aa26.68■■□□□ 1.86
PTPN18-213ENST00000489215 KRT79Q5XKE5 535 aa26.68■■□□□ 1.86
PTPN18-213ENST00000489215 ARL6IP4Q66PJ3 421 aaKnown RBP26.68■■□□□ 1.86
PTPN18-213ENST00000489215 TWF2Q6IBS0 349 aaKnown RBP26.68■■□□□ 1.86
PTPN18-213ENST00000489215 KCTD17Q8N5Z5 321 aa26.68■■□□□ 1.86
PTPN18-213ENST00000489215 SYMPKQ92797 1274 aaKnown RBP26.68■■□□□ 1.86
PTPN18-213ENST00000489215 NFKBIZQ9BYH8 718 aa26.68■■□□□ 1.86
PTPN18-213ENST00000489215 BMP2KQ9NSY1 1161 aaPredicted RBP26.68■■□□□ 1.86
PTPN18-213ENST00000489215 PIN4Q9Y237 131 aaKnown RBP26.68■■□□□ 1.86
PTPN18-213ENST00000489215 BMP15O95972 392 aa26.67■■□□□ 1.86
PTPN18-213ENST00000489215 AXLP30530 894 aa26.67■■□□□ 1.86
PTPN18-213ENST00000489215 ARL2P36404 184 aa26.67■■□□□ 1.86
PTPN18-213ENST00000489215 SPOUT1Q5T280 376 aaKnown RBP26.67■■□□□ 1.86
PTPN18-213ENST00000489215 IFNLR1Q8IU57 520 aaPredicted RBP26.67■■□□□ 1.86
PTPN18-213ENST00000489215 AGPAT5Q9NUQ2 364 aa26.67■■□□□ 1.86
PTPN18-213ENST00000489215 ARHGEF35A5YM69 484 aa26.66■■□□□ 1.86
PTPN18-213ENST00000489215 CARNS1A5YM72 827 aa26.66■■□□□ 1.86
PTPN18-213ENST00000489215 ERLIN2O94905 339 aa26.66■■□□□ 1.86
PTPN18-213ENST00000489215 PTENP60484 403 aa26.66■■□□□ 1.86
PTPN18-213ENST00000489215 MRPS5P82675 430 aaKnown RBP26.66■■□□□ 1.86
PTPN18-213ENST00000489215 ATP2C1P98194 919 aaPredicted RBP26.66■■□□□ 1.86
PTPN18-213ENST00000489215 POTEGQ6S5H5 508 aa26.66■■□□□ 1.86
PTPN18-213ENST00000489215 PGBD4Q96DM1 585 aa26.66■■□□□ 1.86
PTPN18-213ENST00000489215 DAXXQ9UER7 740 aaPredicted RBP26.66■■□□□ 1.86
PTPN18-213ENST00000489215 K7ELQ4 463 aaPredicted RBP26.65■■□□□ 1.86
PTPN18-213ENST00000489215 USO1O60763 962 aaKnown RBP26.65■■□□□ 1.86
PTPN18-213ENST00000489215 ZNF623O75123 536 aa26.65■■□□□ 1.86
PTPN18-213ENST00000489215 SNX29Q8TEQ0 813 aa26.65■■□□□ 1.86
PTPN18-213ENST00000489215 HLA-CQ95604 372 aa26.65■■□□□ 1.86
PTPN18-213ENST00000489215 MRPL9Q9BYD2 267 aaKnown RBP26.65■■□□□ 1.86
PTPN18-213ENST00000489215 NCK2O43639 380 aa26.64■■□□□ 1.86
PTPN18-213ENST00000489215 FGFR1P11362 822 aa26.64■■□□□ 1.86
PTPN18-213ENST00000489215 LAG3P18627 525 aa26.64■■□□□ 1.86
PTPN18-213ENST00000489215 CYP11B2P19099 503 aa26.64■■□□□ 1.86
PTPN18-213ENST00000489215 TJAP1Q5JTD0 557 aa26.64■■□□□ 1.86
PTPN18-213ENST00000489215 PADI6Q6TGC4 694 aa26.64■■□□□ 1.86
PTPN18-213ENST00000489215 ZNF598Q86UK7 904 aaKnown RBP26.64■■□□□ 1.86
PTPN18-213ENST00000489215 LRRC43Q8N309 656 aa26.64■■□□□ 1.86
PTPN18-213ENST00000489215 CNNM3Q8NE01 707 aa26.64■■□□□ 1.86
PTPN18-213ENST00000489215 FAM105AQ9NUU6 356 aa26.64■■□□□ 1.86
PTPN18-213ENST00000489215 PLAGL2Q9UPG8 496 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms