RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 ANKRD40Q6AI12 368 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 CCSAPQ6IQ19 270 aaPredicted RBP12.68□□□□□ -0.38
CMSS1-205ENST00000489081 LRRC71Q8N4P6 559 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 LINC01465Q8N7H1 131 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 SLC17A8Q8NDX2 589 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 TMEM161BQ8NDZ6 487 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 SH3TC2Q8TF17 1288 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 KCNN1Q92952 543 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 IFT74Q96LB3 600 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 DUSP9Q99956 384 aaKnown RBP12.68□□□□□ -0.38
CMSS1-205ENST00000489081 MTG1Q9BT17 334 aaPredicted RBP12.68□□□□□ -0.38
CMSS1-205ENST00000489081 KMT5AQ9NQR1 393 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 FANCLQ9NW38 375 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 PCDHB13Q9Y5F0 798 aa12.68□□□□□ -0.38
CMSS1-205ENST00000489081 ADGRA3Q8IWK6 1321 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 NRCAMQ92823 1304 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 CCDC169A6NNP5 214 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 AP5Z1O43299 807 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 NAMPTP43490 491 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 GTF2BQ00403 316 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 KCNA1Q09470 495 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 PPP2R5AQ15172 486 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 TPD52L1Q16890 204 aaPredicted RBP12.67□□□□□ -0.38
CMSS1-205ENST00000489081 MARCH8Q5T0T0 291 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 LHX8Q68G74 356 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 EFCAB12Q6NXP0 572 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 MTHFD1LQ6UB35 978 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 CXCL17Q6UXB2 119 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 HAUS6Q7Z4H7 955 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 KSR1Q8IVT5 923 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 LMBR1Q8WVP7 490 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 PSPC1Q8WXF1 523 aaKnown RBP12.67□□□□□ -0.38
CMSS1-205ENST00000489081 ZBTB10Q96DT7 871 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 TSG101Q99816 390 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 KIFC3Q9BVG8 833 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 SUGCTQ9HAC7 445 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 SAMSN1Q9NSI8 373 aaKnown RBP12.67□□□□□ -0.38
CMSS1-205ENST00000489081 SETD4Q9NVD3 440 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 ARHGAP28Q9P2N2 729 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 SUCLA2Q9P2R7 463 aaPredicted RBP12.67□□□□□ -0.38
CMSS1-205ENST00000489081 KCNG1Q9UIX4 513 aa12.67□□□□□ -0.38
CMSS1-205ENST00000489081 HOXC8P31273 242 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 DNM2P50570 870 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 CLCN3P51790 818 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 CHMP4BP1P59074 171 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 ADAM17P78536 824 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 CAPSQ13938 189 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 MXD4Q14582 209 aaPredicted RBP12.66□□□□□ -0.38
CMSS1-205ENST00000489081 KCNA10Q16322 511 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 CDKAL1Q5VV42 579 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 SARM1Q6SZW1 724 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 RNF180Q86T96 592 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 CSGALNACT2Q8N6G5 542 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 METTL13Q8N6R0 699 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 PCSK9Q8NBP7 692 aaKnown RBP12.66□□□□□ -0.38
CMSS1-205ENST00000489081 NOC3LQ8WTT2 800 aaKnown RBP12.66□□□□□ -0.38
CMSS1-205ENST00000489081 PPP1R13LQ8WUF5 828 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 PRPF31Q8WWY3 499 aaKnown RBP12.66□□□□□ -0.38
CMSS1-205ENST00000489081 HVCN1Q96D96 273 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 ACCSQ96QU6 501 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.66□□□□□ -0.38
CMSS1-205ENST00000489081 THAP9Q9H5L6 903 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 TRAF3IP3Q9Y228 551 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 ZMYM2Q9UBW7 1377 aa12.66□□□□□ -0.38
CMSS1-205ENST00000489081 DENND3A2RUS2 1198 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 MBLAC1A4D2B0 266 aaPredicted RBP12.65□□□□□ -0.38
CMSS1-205ENST00000489081 LRRIQ4A6NIV6 560 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 H0YCG3 227 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 PDXKO00764 312 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 ASAP2O43150 1006 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 TGFB1I1O43294 461 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 ASGR1P07306 291 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 ATP1A3P13637 1013 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 SCP2P22307 547 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 ABCD1P33897 745 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 LAMTOR4Q0VGL1 99 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 HIC1Q14526 733 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 EDRF1Q3B7T1 1238 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 SLC9C1Q4G0N8 1177 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 CTU1Q7Z7A3 348 aaKnown RBP12.65□□□□□ -0.38
CMSS1-205ENST00000489081 IRF2BP1Q8IU81 584 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 MAP4K3Q8IVH8 894 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 ZC3H3Q8IXZ2 948 aaKnown RBP12.65□□□□□ -0.38
CMSS1-205ENST00000489081 DEPTORQ8TB45 409 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 SRRTQ9BXP5 876 aaKnown RBP12.65□□□□□ -0.38
CMSS1-205ENST00000489081 UNC93B1Q9H1C4 597 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 IKZF4Q9H2S9 585 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 TMEM206Q9H813 350 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 TYW1Q9NV66 732 aaKnown RBP12.65□□□□□ -0.38
CMSS1-205ENST00000489081 HDAC6Q9UBN7 1215 aa12.65□□□□□ -0.38
CMSS1-205ENST00000489081 C17orf102A2RUQ5 167 aa12.64□□□□□ -0.39
CMSS1-205ENST00000489081 CALUO43852 315 aaPredicted RBP12.64□□□□□ -0.39
CMSS1-205ENST00000489081 GJB1P08034 283 aa12.64□□□□□ -0.39
CMSS1-205ENST00000489081 HSPA1AP0DMV8 641 aaKnown RBP12.64□□□□□ -0.39
CMSS1-205ENST00000489081 HSPA1BP0DMV9 641 aaKnown RBP12.64□□□□□ -0.39
CMSS1-205ENST00000489081 TMOD1P28289 359 aa12.64□□□□□ -0.39
CMSS1-205ENST00000489081 FKBP3Q00688 224 aaKnown RBP12.64□□□□□ -0.39
CMSS1-205ENST00000489081 NFIL3Q16649 462 aa12.64□□□□□ -0.39
CMSS1-205ENST00000489081 NBPF20Q3BBV1 942 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms