RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 IL9P15248 144 aa25.73■■□□□ 1.71
COL9A3-213ENST00000489045 GTF2F1P35269 517 aaKnown RBP eCLIP25.73■■□□□ 1.717e-7■■■■□ 19.9
COL9A3-213ENST00000489045 IRS1P35568 1242 aa25.73■■□□□ 1.71
COL9A3-213ENST00000489045 RFC5P40937 340 aa25.73■■□□□ 1.71
COL9A3-213ENST00000489045 KIF2CQ99661 725 aa25.73■■□□□ 1.71
COL9A3-213ENST00000489045 INO80BQ9C086 356 aaPredicted RBP25.73■■□□□ 1.71
COL9A3-213ENST00000489045 IGFLR1Q9H665 355 aa25.73■■□□□ 1.71
COL9A3-213ENST00000489045 DHX33Q9H6R0 707 aaKnown RBP25.73■■□□□ 1.71
COL9A3-213ENST00000489045 ZSWIM4Q9H7M6 989 aa25.73■■□□□ 1.71
COL9A3-213ENST00000489045 DACT1Q9NYF0 836 aa25.73■■□□□ 1.71
COL9A3-213ENST00000489045 PCDHA12Q9UN75 941 aa25.73■■□□□ 1.71
COL9A3-213ENST00000489045 A0A0U1RQF3 1178 aa25.72■■□□□ 1.71
COL9A3-213ENST00000489045 LAG3P18627 525 aa25.72■■□□□ 1.71
COL9A3-213ENST00000489045 LTBRP36941 435 aa25.72■■□□□ 1.71
COL9A3-213ENST00000489045 CTC1Q2NKJ3 1217 aa25.72■■□□□ 1.71
COL9A3-213ENST00000489045 OTUD6AQ7L8S5 288 aa25.72■■□□□ 1.71
COL9A3-213ENST00000489045 EXOC8Q8IYI6 725 aa25.72■■□□□ 1.71
COL9A3-213ENST00000489045 ABI1Q8IZP0 508 aa25.72■■□□□ 1.71
COL9A3-213ENST00000489045 EIF2AK1Q9BQI3 630 aaKnown RBP25.72■■□□□ 1.71
COL9A3-213ENST00000489045 LLPHQ9BRT6 129 aaKnown RBP25.72■■□□□ 1.71
COL9A3-213ENST00000489045 CHST12Q9NRB3 414 aa25.72■■□□□ 1.71
COL9A3-213ENST00000489045 COL4A3BPQ9Y5P4 624 aa25.72■■□□□ 1.71
COL9A3-213ENST00000489045 GRXCR2A6NFK2 248 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 ZBTB39O15060 712 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 FGF18O76093 207 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 ATF7P17544 494 aaPredicted RBP25.71■■□□□ 1.71
COL9A3-213ENST00000489045 SAFBQ15424 915 aaKnown RBP eCLIP25.71■■□□□ 1.71
COL9A3-213ENST00000489045 PUS10Q3MIT2 529 aaKnown RBP25.71■■□□□ 1.71
COL9A3-213ENST00000489045 XKR9Q5GH70 373 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 CLLU1OSQ5K130 101 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 LRRC55Q6ZSA7 311 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 ADGRD2Q7Z7M1 963 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 ZNF598Q86UK7 904 aaKnown RBP25.71■■□□□ 1.71
COL9A3-213ENST00000489045 TPH2Q8IWU9 490 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 THNSL1Q8IYQ7 743 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 LRRC43Q8N309 656 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 PPP2R3CQ969Q6 453 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 TMEM143Q96AN5 459 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 C8orf76Q96K31 380 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 ZSCAN31Q96LW9 406 aaPredicted RBP25.71■■□□□ 1.71
COL9A3-213ENST00000489045 TTC12Q9H892 705 aaPredicted RBP25.71■■□□□ 1.71
COL9A3-213ENST00000489045 PIN4Q9Y237 131 aaKnown RBP25.71■■□□□ 1.71
COL9A3-213ENST00000489045 PCDHGC5Q9Y5F6 944 aa25.71■■□□□ 1.71
COL9A3-213ENST00000489045 LINC01565O15544 149 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 SLITRK3O94933 977 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 EOMESO95936 686 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 TXKP42681 527 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 UBE3AQ05086 875 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 EMC2Q15006 297 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 CSPP1Q1MSJ5 1256 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 CATSPER4Q7RTX7 472 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 HELQQ8TDG4 1101 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 PRPF31Q8WWY3 499 aaKnown RBP25.7■■□□□ 1.7
COL9A3-213ENST00000489045 PSPC1Q8WXF1 523 aaKnown RBP25.7■■□□□ 1.7
COL9A3-213ENST00000489045 MTMR9Q96QG7 549 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 IFT122Q9HBG6 1241 aa25.7■■□□□ 1.7
COL9A3-213ENST00000489045 ATP2B1P20020 1258 aa25.69■■□□□ 1.7
COL9A3-213ENST00000489045 DLX2Q07687 328 aaPredicted RBP25.69■■□□□ 1.7
COL9A3-213ENST00000489045 TWF2Q6IBS0 349 aaKnown RBP25.69■■□□□ 1.7
COL9A3-213ENST00000489045 FAM178BQ8IXR5 827 aa25.69■■□□□ 1.7
COL9A3-213ENST00000489045 GAS2O43903 313 aaKnown RBP25.68■■□□□ 1.7
COL9A3-213ENST00000489045 TBX10O75333 385 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 MCM7P33993 719 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 PHKA2P46019 1235 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 LAMTOR4Q0VGL1 99 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 CLUL1Q15846 466 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 MTRQ99707 1265 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 HSD17B14Q9BPX1 270 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 TRAIPQ9BWF2 469 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 TMEM60Q9H2L4 133 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 CD320Q9NPF0 282 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 TLR9Q9NR96 1032 aa25.68■■□□□ 1.7
COL9A3-213ENST00000489045 SH2B1Q9NRF2 756 aaPredicted RBP25.68■■□□□ 1.7
COL9A3-213ENST00000489045 LYPLA2O95372 231 aa25.67■■□□□ 1.7
COL9A3-213ENST00000489045 SRGAP2CP0DJJ0 459 aa25.67■■□□□ 1.7
COL9A3-213ENST00000489045 PBX3P40426 434 aa25.67■■□□□ 1.7
COL9A3-213ENST00000489045 NRIP1P48552 1158 aa25.67■■□□□ 1.7
COL9A3-213ENST00000489045 HMGN5P82970 282 aaKnown RBP25.67■■□□□ 1.7
COL9A3-213ENST00000489045 ADAM15Q13444 863 aa25.67■■□□□ 1.7
COL9A3-213ENST00000489045 KCNT2Q6UVM3 1135 aa25.67■■□□□ 1.7
COL9A3-213ENST00000489045 RBM23Q86U06 439 aaKnown RBP25.67■■□□□ 1.7
COL9A3-213ENST00000489045 MICAL1Q8TDZ2 1067 aa25.67■■□□□ 1.7
COL9A3-213ENST00000489045 TCP11Q8WWU5 503 aa25.67■■□□□ 1.7
COL9A3-213ENST00000489045 ZNF558Q96NG5 402 aa25.67■■□□□ 1.7
COL9A3-213ENST00000489045 POTEMA6NI47 508 aa25.66■■□□□ 1.7
COL9A3-213ENST00000489045 ERVFC1P60507 584 aa25.66■■□□□ 1.7
COL9A3-213ENST00000489045 FERMT3Q86UX7 667 aa25.66■■□□□ 1.7
COL9A3-213ENST00000489045 EFHBQ8N7U6 833 aa25.66■■□□□ 1.7
COL9A3-213ENST00000489045 MINDY3Q9H8M7 445 aa25.66■■□□□ 1.7
COL9A3-213ENST00000489045 XPNPEP1Q9NQW7 623 aa25.66■■□□□ 1.7
COL9A3-213ENST00000489045 AGPAT5Q9NUQ2 364 aa25.66■■□□□ 1.7
COL9A3-213ENST00000489045 FAM105AQ9NUU6 356 aa25.66■■□□□ 1.7
COL9A3-213ENST00000489045 FAM50BQ9Y247 325 aa25.66■■□□□ 1.7
COL9A3-213ENST00000489045 SKIP12755 728 aa25.65■■□□□ 1.7
COL9A3-213ENST00000489045 RBM25P49756 843 aaKnown RBP25.65■■□□□ 1.7
COL9A3-213ENST00000489045 NDUFV1P49821 464 aa25.65■■□□□ 1.7
COL9A3-213ENST00000489045 LONRF3Q496Y0 759 aa25.65■■□□□ 1.7
COL9A3-213ENST00000489045 SRGAP1Q7Z6B7 1085 aa25.65■■□□□ 1.7
COL9A3-213ENST00000489045 FAM184AQ8NB25 1140 aa25.65■■□□□ 1.7
COL9A3-213ENST00000489045 RNF149Q8NC42 400 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms