RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 PGBD4Q96DM1 585 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 IFT74Q96LB3 600 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 PLVAPQ9BX97 442 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 TRIM6Q9C030 488 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 ELAC1Q9H777 363 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 WRAP73Q9P2S5 460 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 DBR1Q9UK59 544 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 WNT7AO00755 349 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 ZBTB39O15060 712 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 EOMESO95936 686 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 BMPR1AP36894 532 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 RARRES1P49788 294 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 RNASELQ05823 741 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 PPP2R5AQ15172 486 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 TIGD5Q53EQ6 642 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 POTEGQ6S5H5 508 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 EP400NLQ6ZTU2 488 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 RTN4RL1Q86UN2 441 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 KSR1Q8IVT5 923 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 THNSL1Q8IYQ7 743 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 MICAL1Q8TDZ2 1067 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 MRPL9Q9BYD2 267 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 NT5C3AQ9H0P0 336 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 POLR3FQ9H1D9 316 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 THEGQ9P2T0 379 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 KIAA1024Q9UPX6 916 aa12.44□□□□□ -0.42
ARHGEF39-204ENST00000488918 CARNS1A5YM72 827 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 VWA3AA6NCI4 1184 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 C9IYK1 514 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 H3BNC9 293 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 MGEA5O60502 916 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 LPXNO60711 386 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 MED24O75448 989 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 SSBP05455 408 aaKnown RBP eCLIP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 PDIA4P13667 645 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 AXLP30530 894 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 UBA7P41226 1012 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 KRT17Q04695 432 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 CUL4AQ13619 759 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 ADGRE1Q14246 886 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 NAALADL2Q58DX5 795 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 ARL6IP4Q66PJ3 421 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 PADI6Q6TGC4 694 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 GLB1LQ6UWU2 654 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 APBB1IPQ7Z5R6 666 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 LRRC43Q8N309 656 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 TMEM87AQ8NBN3 555 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 DEPTORQ8TB45 409 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 URGCPQ8TCY9 931 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 LINC01599Q8WXQ3 324 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 RSPH1Q8WYR4 309 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 SYMPKQ92797 1274 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 MRPL38Q96DV4 380 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 CALML4Q96GE6 196 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 FAM193BQ96PV7 902 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 TMEM117Q9H0C3 514 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 C2orf40Q9H1Z8 148 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 DDX19AQ9NUU7 478 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 PUF60Q9UHX1 559 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 MTCH2Q9Y6C9 303 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 TET1Q8NFU7 2136 aa12.43□□□□□ -0.42
ARHGEF39-204ENST00000488918 A0A0U1RQF3 1178 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 EPOPA6NHQ4 379 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 ARHGEF15O94989 841 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 CSPG5O95196 566 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 SPATA31C1P0DKV0 1188 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 LAG3P18627 525 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 LIG1P18858 919 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 TXLNAP40222 546 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 ALDH7A1P49419 539 aaKnown RBP12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 MRPS5P82675 430 aaKnown RBP12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 NOTUMQ6P988 496 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 ECHDC2Q86YB7 292 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 KIFAP3Q92845 792 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 HLA-CQ95604 372 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 ZNF689Q96CS4 500 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 CEP89Q96ST8 783 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 LMAN2LQ9H0V9 348 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 BHMT2Q9H2M3 363 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 COG5Q9UP83 839 aa12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 MRPL42Q9Y6G3 142 aaKnown RBP12.42□□□□□ -0.42
ARHGEF39-204ENST00000488918 A0A087WWV3 80 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 NR1I2O75469 434 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 FGFR1P11362 822 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 POU3F3P20264 500 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 CA8P35219 290 aa12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 ATP2C1P98194 919 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF39-204ENST00000488918 POU5F1BQ06416 359 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms