RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 ZNF558Q96NG5 402 aa20.53■□□□□ 0.88
ATG9A-222ENST00000488833 FDXACB1Q9BRP7 624 aaPredicted RBP20.53■□□□□ 0.88
ATG9A-222ENST00000488833 ORC3Q9UBD5 711 aaPredicted RBP20.53■□□□□ 0.88
ATG9A-222ENST00000488833 A0A0U1RQF3 1178 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 FSCN2O14926 492 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 PER2O15055 1255 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 MARCH6O60337 910 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 MAFO75444 373 aaPredicted RBP20.52■□□□□ 0.88
ATG9A-222ENST00000488833 PPM1AP35813 382 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 PBX3P40426 434 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 QARSP47897 775 aaKnown RBP20.52■□□□□ 0.88
ATG9A-222ENST00000488833 KCNT2Q6UVM3 1135 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 ZNF598Q86UK7 904 aaKnown RBP20.52■□□□□ 0.88
ATG9A-222ENST00000488833 ZNF410Q86VK4 478 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 SMRP1Q8NCR6 262 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 MRPS27Q92552 414 aaKnown RBP20.52■□□□□ 0.88
ATG9A-222ENST00000488833 WASF1Q92558 559 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 NLRP4Q96MN2 994 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 NAP1L4Q99733 375 aaKnown RBP20.52■□□□□ 0.88
ATG9A-222ENST00000488833 JPH2Q9BR39 696 aaPredicted RBP20.52■□□□□ 0.88
ATG9A-222ENST00000488833 ENTPD7Q9NQZ7 604 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 LZTS1Q9Y250 596 aa20.52■□□□□ 0.88
ATG9A-222ENST00000488833 DKC1O60832 514 aaKnown RBP eCLIP20.51■□□□□ 0.87
ATG9A-222ENST00000488833 EYA4O95677 639 aa20.51■□□□□ 0.87
ATG9A-222ENST00000488833 ATF7P17544 494 aaPredicted RBP20.51■□□□□ 0.87
ATG9A-222ENST00000488833 PLCB3Q01970 1234 aa20.51■□□□□ 0.87
ATG9A-222ENST00000488833 COASYQ13057 564 aa20.51■□□□□ 0.87
ATG9A-222ENST00000488833 DUSP6Q16828 381 aa20.51■□□□□ 0.87
ATG9A-222ENST00000488833 PDE12Q6L8Q7 609 aaKnown RBP20.51■□□□□ 0.87
ATG9A-222ENST00000488833 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
ATG9A-222ENST00000488833 CDCA3Q99618 268 aaPredicted RBP20.51■□□□□ 0.87
ATG9A-222ENST00000488833 INO80BQ9C086 356 aaPredicted RBP20.51■□□□□ 0.87
ATG9A-222ENST00000488833 CYP26B1Q9NR63 512 aa20.51■□□□□ 0.87
ATG9A-222ENST00000488833 CHST12Q9NRB3 414 aa20.51■□□□□ 0.87
ATG9A-222ENST00000488833 PUF60Q9UHX1 559 aaKnown RBP20.51■□□□□ 0.87
ATG9A-222ENST00000488833 PIN4Q9Y237 131 aaKnown RBP20.51■□□□□ 0.87
ATG9A-222ENST00000488833 C5orf42Q9H799 3197 aa20.51■□□□□ 0.87
ATG9A-222ENST00000488833 FSD2A1L4K1 749 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 FAM205CA6NFA0 338 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 TBX3O15119 743 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 EOMESO95936 686 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 P4HBP07237 508 aaKnown RBP20.5■□□□□ 0.87
ATG9A-222ENST00000488833 PLA2G5P39877 138 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 NPEPPSP55786 919 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 EARS2Q5JPH6 523 aaKnown RBP20.5■□□□□ 0.87
ATG9A-222ENST00000488833 TWF2Q6IBS0 349 aaKnown RBP20.5■□□□□ 0.87
ATG9A-222ENST00000488833 CATSPER4Q7RTX7 472 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 KSR1Q8IVT5 923 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 NECAB1Q8N987 351 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 HAS1Q92839 578 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 FAM122AQ96E09 287 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 TCF25Q9BQ70 676 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 LXNQ9BS40 222 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 MRPL9Q9BYD2 267 aaKnown RBP20.5■□□□□ 0.87
ATG9A-222ENST00000488833 BRMS1Q9HCU9 246 aa20.5■□□□□ 0.87
ATG9A-222ENST00000488833 PRR33A8MZF0 331 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 LARGE1O95461 756 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 KRT2P35908 639 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 PHKA2P46019 1235 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 POLGP54098 1239 aaPredicted RBP20.49■□□□□ 0.87
ATG9A-222ENST00000488833 RBM10P98175 930 aaKnown RBP20.49■□□□□ 0.87
ATG9A-222ENST00000488833 NR5A1Q13285 461 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 NCAPH2Q6IBW4 605 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 VN1R2Q8NFZ6 395 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 SLC7A3Q8WY07 619 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 GTF3C6Q969F1 213 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 CEP170P1Q96L14 293 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 SPG21Q9NZD8 308 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 WRAP73Q9P2S5 460 aaPredicted RBP20.49■□□□□ 0.87
ATG9A-222ENST00000488833 USP15Q9Y4E8 981 aaPredicted RBP20.49■□□□□ 0.87
ATG9A-222ENST00000488833 COL4A3BPQ9Y5P4 624 aa20.49■□□□□ 0.87
ATG9A-222ENST00000488833 ARID2Q68CP9 1835 aa20.48■□□□□ 0.87
ATG9A-222ENST00000488833 SRGAP2BP0DMP2 458 aa20.48■□□□□ 0.87
ATG9A-222ENST00000488833 KRT17Q04695 432 aa20.48■□□□□ 0.87
ATG9A-222ENST00000488833 EPHA7Q15375 998 aa20.48■□□□□ 0.87
ATG9A-222ENST00000488833 ME3Q16798 604 aa20.48■□□□□ 0.87
ATG9A-222ENST00000488833 ZNF579Q8NAF0 562 aaKnown RBP20.48■□□□□ 0.87
ATG9A-222ENST00000488833 NGRNQ9NPE2 291 aaKnown RBP20.48■□□□□ 0.87
ATG9A-222ENST00000488833 BMP2KQ9NSY1 1161 aaPredicted RBP20.48■□□□□ 0.87
ATG9A-222ENST00000488833 MUC6Q6W4X9 2439 aa20.48■□□□□ 0.87
ATG9A-222ENST00000488833 BAG4O95429 457 aaKnown RBP20.47■□□□□ 0.87
ATG9A-222ENST00000488833 FDPSP14324 419 aaKnown RBP20.47■□□□□ 0.87
ATG9A-222ENST00000488833 RFC5P40937 340 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 FOSBP53539 338 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 LONRF3Q496Y0 759 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 TMC7Q7Z402 723 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 EXOC8Q8IYI6 725 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 SLFN12Q8IYM2 578 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 SLC39A11Q8N1S5 342 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 LPPQ93052 612 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 TMEM143Q96AN5 459 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 DYDC2Q96IM9 177 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 DHX33Q9H6R0 707 aaKnown RBP20.47■□□□□ 0.87
ATG9A-222ENST00000488833 RGL1Q9NZL6 768 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 MUTYHQ9UIF7 546 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 PPME1Q9Y570 386 aa20.47■□□□□ 0.87
ATG9A-222ENST00000488833 HIDE1A8MVS5 230 aa20.46■□□□□ 0.87
ATG9A-222ENST00000488833 SKIP12755 728 aa20.46■□□□□ 0.87
ATG9A-222ENST00000488833 YWHABP31946 246 aaKnown RBP20.46■□□□□ 0.87
ATG9A-222ENST00000488833 RAB27AP51159 221 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms