RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 TARBP2Q15633 366 aaKnown RBP8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 FSCN1Q16658 493 aaKnown RBP8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 COBLL1Q53SF7 1204 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 GNASQ5JWF2 1037 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 SPATA1Q5VX52 437 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 DHX40Q8IX18 779 aaKnown RBP8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 GUF1Q8N442 669 aaKnown RBP8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 KIAA0895Q8NCT3 520 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 SLC17A8Q8NDX2 589 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 TCP11Q8WWU5 503 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 RNF166Q96A37 237 aaPredicted RBP8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 LENG1Q96BZ8 264 aaPredicted RBP8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 C16orf70Q9BSU1 422 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 RNPEPQ9H4A4 650 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 DHX33Q9H6R0 707 aaKnown RBP8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 SUGCTQ9HAC7 445 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 C17orf75Q9HAS0 396 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 PDLIM7Q9NR12 457 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 OLFML3Q9NRN5 406 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 RWDD2AQ9UIY3 292 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 CTNND2Q9UQB3 1225 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 PCDHA2Q9Y5H9 948 aa8.35□□□□□ -1.07
APOBEC3A-203ENST00000488758 SYNRGQ9UMZ2 1314 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 RRN3P2A6NIE6 340 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 CCDC169A6NNP5 214 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 MAGEB2O15479 319 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 GAS2O43903 313 aaKnown RBP8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 MSCO60682 206 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 MAFO75444 373 aaPredicted RBP8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 FGFR1OPO95684 399 aaKnown RBP8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 PGK1P00558 417 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 INHAP05111 366 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 INSRRP14616 1297 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 CDK11BP21127 795 aaKnown RBP8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 CCNE1P24864 410 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 DNM2P50570 870 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 PEX3P56589 373 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 MAPK7Q13164 816 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 DMP1Q13316 513 aaPredicted RBP8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 ALCAMQ13740 583 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 EMC2Q15006 297 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 PPP2R5AQ15172 486 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 IER5Q5VY09 327 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 EFCAB12Q6NXP0 572 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 ZNF720Q7Z2F6 126 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 DAW1Q8N136 415 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 RETREG2Q8NC44 543 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 P2RX5Q93086 422 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 TMEM143Q96AN5 459 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 TSG101Q99816 390 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 KATNAL1Q9BW62 490 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 POLR3FQ9H1D9 316 aaPredicted RBP8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 HMX1Q9NP08 348 aaPredicted RBP8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 GPRC5CQ9NQ84 441 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 XPNPEP3Q9NQH7 507 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 DDX20Q9UHI6 824 aaKnown RBP8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 NFE2L3Q9Y4A8 694 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 PTCH2Q9Y6C5 1203 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 COL1A2P08123 1366 aa8.34□□□□□ -1.07
APOBEC3A-203ENST00000488758 H0YCG3 227 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 K7ENM7 598 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 EIF3DO15371 548 aaKnown RBP eCLIP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 CALUO43852 315 aaPredicted RBP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 PRPF6O94906 941 aaKnown RBP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 F2P00734 622 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 MYBP10242 640 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 KLRC1P26715 233 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 TMOD1P28289 359 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 NMT1P30419 496 aaKnown RBP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 ABCD1P33897 745 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 RTP1P59025 263 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 NKX3-2P78367 333 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 PPFIA1Q13136 1202 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 NCAPHQ15003 741 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 KIAA0753Q2KHM9 967 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 MAP3K21Q5TCX8 1036 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 ANKRD40Q6AI12 368 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 CENPPQ6IPU0 288 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 RNF180Q86T96 592 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 CREBRFQ8IUR6 639 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 NELFCDQ8IXH7 590 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 SYCP3Q8IZU3 236 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 METTL13Q8N6R0 699 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 PCSK9Q8NBP7 692 aaKnown RBP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 DEPTORQ8TB45 409 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 ZNF507Q8TCN5 953 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 NOC3LQ8WTT2 800 aaKnown RBP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 SCFD1Q8WVM8 642 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 CEP89Q96ST8 783 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 MTG1Q9BT17 334 aaPredicted RBP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 FGFBP2Q9BYJ0 223 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 UPF3AQ9H1J1 476 aaKnown RBP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 KMT5AQ9NQR1 393 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 XPNPEP1Q9NQW7 623 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 FANCLQ9NW38 375 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 SUCLA2Q9P2R7 463 aaPredicted RBP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 MAGEC2Q9UBF1 373 aaPredicted RBP8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 PTPN22Q9Y2R2 807 aa8.33□□□□□ -1.08
APOBEC3A-203ENST00000488758 MYH11P35749 1972 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms