RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 ITGB5P18084 799 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 INPP5BP32019 993 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 PPP2R5CQ13362 524 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 H2AFVQ71UI9 128 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 ZNF720Q7Z2F6 126 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 IQCKQ8N0W5 287 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 C7orf43Q8WVR3 580 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 UBLCP1Q8WVY7 318 aaPredicted RBP13.78□□□□□ -0.2
CLIC4-202ENST00000488683 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
CLIC4-202ENST00000488683 RASSF4Q9H2L5 321 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 FBXL5Q9UKA1 691 aa13.78□□□□□ -0.2
CLIC4-202ENST00000488683 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
CLIC4-202ENST00000488683 GCOM1H8Y6P7 765 aaPredicted RBP13.77□□□□□ -0.2
CLIC4-202ENST00000488683 K7ENM7 598 aa13.77□□□□□ -0.2
CLIC4-202ENST00000488683 POLR2MP0CAP2 368 aa13.77□□□□□ -0.2
CLIC4-202ENST00000488683 TMOD1P28289 359 aa13.77□□□□□ -0.2
CLIC4-202ENST00000488683 PSMC2P35998 433 aaKnown RBP13.77□□□□□ -0.2
CLIC4-202ENST00000488683 SP4Q02446 784 aa13.77□□□□□ -0.2
CLIC4-202ENST00000488683 PDE4CQ08493 712 aa13.77□□□□□ -0.2
CLIC4-202ENST00000488683 SPP2Q13103 211 aa13.77□□□□□ -0.2
CLIC4-202ENST00000488683 NT5DC3Q86UY8 548 aa13.77□□□□□ -0.2
CLIC4-202ENST00000488683 INTS2Q9H0H0 1204 aaKnown RBP13.77□□□□□ -0.2
CLIC4-202ENST00000488683 TUFT1Q9NNX1 390 aa13.77□□□□□ -0.2
CLIC4-202ENST00000488683 SMIM23A6NLE4 172 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 EIF3DO15371 548 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLIC4-202ENST00000488683 FLOT1O75955 427 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 GAP43P17677 238 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 SSTR3P32745 418 aaPredicted RBP13.77□□□□□ -0.21
CLIC4-202ENST00000488683 HSD17B3P37058 310 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 PRELPP51888 382 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 PAK2Q13177 524 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 SLC15A2Q16348 729 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 CEP55Q53EZ4 464 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 C10orf76Q5T2E6 689 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 PLA2G4FQ68DD2 849 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 PACS2Q86VP3 889 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 LDHDQ86WU2 507 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 PLEKHO2Q8TD55 490 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 TMX2Q9Y320 296 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 STK24Q9Y6E0 443 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 FRMPD4Q14CM0 1322 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 IPO5O00410 1097 aaKnown RBP13.77□□□□□ -0.21
CLIC4-202ENST00000488683 SOX5P35711 763 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 STAT1P42224 750 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 PPP3CAQ08209 521 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 PPFIA1Q13136 1202 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 UGCGQ16739 394 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 NBPF9Q3BBW0 867 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 C2CD6Q53TS8 623 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 ALS2CLQ60I27 953 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 STYK1Q6J9G0 422 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 SCFD2Q8WU76 684 aa13.77□□□□□ -0.21
CLIC4-202ENST00000488683 UBE2TQ9NPD8 197 aaPredicted RBP13.77□□□□□ -0.21
CLIC4-202ENST00000488683 EMSYQ7Z589 1322 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 GTPBP10A4D1E9 387 aaKnown RBP13.76□□□□□ -0.21
CLIC4-202ENST00000488683 GOLGA8KD6RF30 607 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 ZNF131P52739 623 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 NPEPPSP55786 919 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 ALG3Q92685 438 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 KRT35Q92764 455 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 SAAL1Q96ER3 474 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
CLIC4-202ENST00000488683 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 PPANQ9NQ55 473 aaKnown RBP13.76□□□□□ -0.21
CLIC4-202ENST00000488683 STXBP5LQ9Y2K9 1186 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 EIF3HO15372 352 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLIC4-202ENST00000488683 VIL1P09327 827 aaKnown RBP13.76□□□□□ -0.21
CLIC4-202ENST00000488683 EIF2AK2P19525 551 aaKnown RBP13.76□□□□□ -0.21
CLIC4-202ENST00000488683 DAB2IPQ5VWQ8 1189 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 NSMFQ6X4W1 530 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 SLFN11Q7Z7L1 901 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 SLC30A5Q8TAD4 765 aa13.76□□□□□ -0.21
CLIC4-202ENST00000488683 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
CLIC4-202ENST00000488683 CNTNAP1P78357 1384 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 ARHGEF35A5YM69 484 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 PGRMC1O00264 195 aaKnown RBP13.75□□□□□ -0.21
CLIC4-202ENST00000488683 OPA1O60313 960 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 EGFRP00533 1210 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 TNNC1P63316 161 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 MYL7Q01449 175 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 MAPK7Q13164 816 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 CCDC127Q96BQ5 260 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 TAF1DQ9H5J8 278 aaPredicted RBP13.75□□□□□ -0.21
CLIC4-202ENST00000488683 DMAC2Q9NW81 257 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 ZNF70Q9UC06 446 aaPredicted RBP13.75□□□□□ -0.21
CLIC4-202ENST00000488683 HERC5Q9UII4 1024 aaKnown RBP13.75□□□□□ -0.21
CLIC4-202ENST00000488683 TCRBV7S2A1N4TA0A589 114 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 PLSCR1O15162 318 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 SLC16A4O15374 487 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
CLIC4-202ENST00000488683 ALAS1P13196 640 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 DHX9Q08211 1270 aaKnown RBP13.75□□□□□ -0.21
CLIC4-202ENST00000488683 ITGB3BPQ13352 177 aaPredicted RBP13.75□□□□□ -0.21
CLIC4-202ENST00000488683 LLGL2Q6P1M3 1020 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 PADI6Q6TGC4 694 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 B3GNT9Q6UX72 402 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 MICALL1Q8N3F8 863 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms