RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TMEM161AQ9NX61 479 aa17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 A0A0U1RQF3 1178 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 PP2D1A8MPX8 630 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 C5orf67F2Z3F1 127 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 ZSCAN20P17040 1043 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 PDCP20941 246 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 SYT1P21579 422 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 CDC25AP30304 524 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 CCT6AP40227 531 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 POU5F1BQ06416 359 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 MXD4Q14582 209 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 CCDC85BQ15834 202 aaPredicted RBP17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 HAUS3Q68CZ6 603 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 DTHD1Q6ZMT9 781 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 BRAPQ7Z569 592 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 SRGAP1Q7Z6B7 1085 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 ZNF598Q86UK7 904 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 ECHDC2Q86YB7 292 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 RNF149Q8NC42 400 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 SLC17A8Q8NDX2 589 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 FBXO22Q8NEZ5 403 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 TRAIPQ9BWF2 469 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 LMCD1Q9NZU5 365 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 LRFN2Q9ULH4 789 aa17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 MRPL42Q9Y6G3 142 aaKnown RBP17.75■□□□□ 0.43
CTDSP1-209ENST00000488627 H3BNC9 293 aa17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 USO1O60763 962 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 ATF7P17544 494 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 SFPQP23246 707 aaKnown RBP eCLIP17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 GLRA2P23416 452 aa17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 HOXA11P31270 313 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 PTENP60484 403 aa17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 ARL6IP4Q66PJ3 421 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 IFNLR1Q8IU57 520 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 PPM1EQ8WY54 764 aa17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 GPRC5CQ9NQ84 441 aa17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 PRDM6Q9NQX0 595 aa17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 KIAA1024Q9UPX6 916 aa17.74■□□□□ 0.43
CTDSP1-209ENST00000488627 VPS37CA5D8V6 355 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 GTPBP6O43824 516 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 RB1P06400 928 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 FGFR1P11362 822 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 CYP11B2P19099 503 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 IBSPP21815 317 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 CAPSQ13938 189 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 PAN2Q504Q3 1202 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 PADI6Q6TGC4 694 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 CATSPER4Q7RTX7 472 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 SNX29Q8TEQ0 813 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 RAB34Q9BZG1 259 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 POLR3FQ9H1D9 316 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 AGPAT5Q9NUQ2 364 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 MTMR6Q9Y217 621 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 STK24Q9Y6E0 443 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 A0A0C4DFX4 3053 aa17.73■□□□□ 0.43
CTDSP1-209ENST00000488627 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 TBKBP1A7MCY6 615 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 EOMESO95936 686 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 RESTQ13127 1097 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 GPM6BQ13491 265 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 MAEAQ7L5Y9 396 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 KCNK18Q7Z418 384 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 MCPH1Q8NEM0 835 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 CCDC43Q96MW1 224 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 CASD1Q96PB1 797 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 NFKBIZQ9BYH8 718 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 DDX19AQ9NUU7 478 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 DACT1Q9NYF0 836 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 PIN4Q9Y237 131 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 RWDD3Q9Y3V2 267 aa17.72■□□□□ 0.43
CTDSP1-209ENST00000488627 ARHGEF35A5YM69 484 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 VWA3AA6NCI4 1184 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 ZNF623O75123 536 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 CTNNB1P35222 781 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 PHKA2P46019 1235 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 AMHR2Q16671 573 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 CLLU1OSQ5K130 101 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 HYIQ5T013 277 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 KRT79Q5XKE5 535 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 LRRC55Q6ZSA7 311 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 MICALL1Q8N3F8 863 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 PLVAPQ9BX97 442 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 TMEM117Q9H0C3 514 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 BHMT2Q9H2M3 363 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 HCSTQ9UBK5 93 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 TRANK1O15050 2925 aa17.71■□□□□ 0.43
CTDSP1-209ENST00000488627 LOXHD1Q8IVV2 1947 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 E9PMD0 336 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 MBTD1Q05BQ5 628 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 TFDP1Q14186 410 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 PCBP1Q15365 356 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■■■■■ 43
CTDSP1-209ENST00000488627 SF3A1Q15459 793 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 UBXN11Q5T124 520 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 FAM173BQ6P4H8 233 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 BSNDQ8WZ55 320 aa17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 MRPL38Q96DV4 380 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-209ENST00000488627 PNMA5Q96PV4 448 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms