RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 PI16Q6UXB8 463 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 TRABDQ9H4I3 376 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 PDP2Q9P2J9 529 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 GGT7Q9UJ14 662 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 IZUMO3Q5VZ72 239 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 WDR93Q6P2C0 686 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 ZBED8Q8IZ13 594 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 PPM1NQ8N819 430 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 RAD54LQ92698 747 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 PPCSQ9HAB8 311 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 NOD1Q9Y239 953 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 YEATS2Q9ULM3 1422 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 SAMD9Q5K651 1589 aa8.8□□□□□ -1
MCF2L2-212ENST00000488149 UBN2Q6ZU65 1347 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 PNMA6FA0A0J9YX94 578 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 ZNF233A6NK53 670 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 DEAF1O75398 565 aaPredicted RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 CALB1P05937 261 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 SMARCA1P28370 1054 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 COASYQ13057 564 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 DLGAP5Q15398 846 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 SLC18A3Q16572 532 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 ENAHQ8N8S7 591 aaPredicted RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 ALKBH8Q96BT7 664 aaKnown RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 RANBP17Q9H2T7 1088 aaKnown RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 ZWILCHQ9H900 591 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 DLGAP2Q9P1A6 1054 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 TUBE1Q9UJT0 475 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 ESRRBO95718 433 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 FTLP02792 175 aaPredicted RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 ACADSP16219 412 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 SERPINB3P29508 390 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 TMED10P49755 219 aaKnown RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 SEC24CP53992 1094 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 TFAMQ00059 246 aaKnown RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 NOA1Q8NC60 698 aaKnown RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 HIC2Q96JB3 615 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 GCOM2Q9BZD3 368 aaPredicted RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 CD248Q9HCU0 757 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 CFAP74Q9C0B2 1584 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 GOLGA8MH3BSY2 632 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 ATP2C1P98194 919 aaPredicted RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 KNOP1Q1ED39 458 aaKnown RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 OR6B2Q6IFH4 312 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 RAD9BQ6WBX8 426 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 KDM7AQ6ZMT4 941 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 RFX8Q6ZV50 586 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 SUPT20HQ8NEM7 779 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 MS4A14Q96JA4 679 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 CEP170P1Q96L14 293 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 ZBTB18Q99592 522 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 LY9Q9HBG7 655 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 STRIP2Q9ULQ0 834 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 TRPC1P48995 793 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 MRPS15P82914 257 aaKnown RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 DRAP1Q14919 205 aaPredicted RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 MAPRE2Q15555 327 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 NAALADL2Q58DX5 795 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 KCTD1Q719H9 257 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 SKA2Q8WVK7 121 aaPredicted RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 ERP27Q96DN0 273 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 ROPN1BQ9BZX4 212 aaPredicted RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 CCDC90BQ9GZT6 254 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 ROPN1Q9HAT0 212 aaPredicted RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 ZNF229Q9UJW7 825 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 FAM47DPA6NHR8 397 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 FOXN1O15353 648 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 SRGNP10124 158 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 PAMP19021 973 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 FXR1P51114 621 aaKnown RBP eCLIP8.79□□□□□ -1
MCF2L2-212ENST00000488149 RHOT1Q8IXI2 618 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 TMEM35BQ8NCS4 154 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 KDM6BO15054 1643 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 CCDC195A0A1B0GUA6 201 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 DAB1O75553 588 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 VHLP40337 213 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 KRT17Q04695 432 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 KPNB1Q14974 876 aaKnown RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 CEP55Q53EZ4 464 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 PSPC1Q8WXF1 523 aaKnown RBP8.79□□□□□ -1
MCF2L2-212ENST00000488149 VPS11Q9H270 941 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 KANSL2Q9H9L4 492 aa8.79□□□□□ -1
MCF2L2-212ENST00000488149 IGF2BP3O00425 579 aaKnown RBP eCLIP8.78□□□□□ -1
MCF2L2-212ENST00000488149 MYBL1P10243 752 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 HSPH1Q92598 858 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 BRIP1Q9BX63 1249 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 RBM12Q9NTZ6 932 aaKnown RBP8.78□□□□□ -1
MCF2L2-212ENST00000488149 NXF1Q9UBU9 619 aaKnown RBP8.78□□□□□ -1
MCF2L2-212ENST00000488149 IL10P22301 178 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 AARSP49588 968 aaKnown RBP eCLIP8.78□□□□□ -1
MCF2L2-212ENST00000488149 FLOT2Q14254 428 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 CYTH1Q15438 398 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 TBC1D10CQ8IV04 446 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 EXOC8Q8IYI6 725 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 XXYLT1Q8NBI6 393 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 ATL2Q8NHH9 583 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 OXER1Q8TDS5 423 aa8.78□□□□□ -1
MCF2L2-212ENST00000488149 DDX28Q9NUL7 540 aaKnown RBP8.78□□□□□ -1
MCF2L2-212ENST00000488149 SUCLA2Q9P2R7 463 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms