RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 MED24O75448 989 aa26.43■■□□□ 1.82
RNF38-208ENST00000488058 SPATA31C1P0DKV0 1188 aa26.43■■□□□ 1.82
RNF38-208ENST00000488058 TOB1P50616 345 aaPredicted RBP26.43■■□□□ 1.82
RNF38-208ENST00000488058 FAM189BP81408 668 aa26.43■■□□□ 1.82
RNF38-208ENST00000488058 CATSPER3Q86XQ3 398 aa26.43■■□□□ 1.82
RNF38-208ENST00000488058 ECHDC2Q86YB7 292 aa26.43■■□□□ 1.82
RNF38-208ENST00000488058 ATXN2LQ8WWM7 1075 aaKnown RBP26.43■■□□□ 1.82
RNF38-208ENST00000488058 XPNPEP1Q9NQW7 623 aa26.43■■□□□ 1.82
RNF38-208ENST00000488058 DACT1Q9NYF0 836 aa26.43■■□□□ 1.82
RNF38-208ENST00000488058 PIN4Q9Y237 131 aaKnown RBP26.43■■□□□ 1.82
RNF38-208ENST00000488058 GTF3C3Q9Y5Q9 886 aa26.43■■□□□ 1.82
RNF38-208ENST00000488058 RARRES1P49788 294 aa26.42■■□□□ 1.82
RNF38-208ENST00000488058 PTGDRQ13258 359 aa26.42■■□□□ 1.82
RNF38-208ENST00000488058 TWF2Q6IBS0 349 aaKnown RBP26.42■■□□□ 1.82
RNF38-208ENST00000488058 FERMT3Q86UX7 667 aa26.42■■□□□ 1.82
RNF38-208ENST00000488058 RNF149Q8NC42 400 aa26.42■■□□□ 1.82
RNF38-208ENST00000488058 COL25A1Q9BXS0 654 aaPredicted RBP26.42■■□□□ 1.82
RNF38-208ENST00000488058 IFT122Q9HBG6 1241 aa26.42■■□□□ 1.82
RNF38-208ENST00000488058 GRM6O15303 877 aa26.41■■□□□ 1.82
RNF38-208ENST00000488058 USO1O60763 962 aaKnown RBP26.41■■□□□ 1.82
RNF38-208ENST00000488058 DGAT1O75907 488 aa26.41■■□□□ 1.82
RNF38-208ENST00000488058 MRPS5P82675 430 aaKnown RBP26.41■■□□□ 1.82
RNF38-208ENST00000488058 TFF2Q03403 129 aa26.41■■□□□ 1.82
RNF38-208ENST00000488058 TJAP1Q5JTD0 557 aa26.41■■□□□ 1.82
RNF38-208ENST00000488058 POTEGQ6S5H5 508 aa26.41■■□□□ 1.82
RNF38-208ENST00000488058 ABI1Q8IZP0 508 aa26.41■■□□□ 1.82
RNF38-208ENST00000488058 C4orf32Q8N8J7 132 aa26.41■■□□□ 1.82
RNF38-208ENST00000488058 POLR3CQ9BUI4 534 aaPredicted RBP26.41■■□□□ 1.82
RNF38-208ENST00000488058 ALG13Q9NP73 1137 aaKnown RBP26.41■■□□□ 1.82
RNF38-208ENST00000488058 ASAP2O43150 1006 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 HOXA2O43364 376 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 TIGD5Q53EQ6 642 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 LARP1BQ659C4 914 aaKnown RBP26.4■■□□□ 1.82
RNF38-208ENST00000488058 HAUS3Q68CZ6 603 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 MAEAQ7L5Y9 396 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 SRGAP1Q7Z6B7 1085 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 ASB2Q96Q27 587 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 PLVAPQ9BX97 442 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 CHST12Q9NRB3 414 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 HCSTQ9UBK5 93 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 LRWD1Q9UFC0 647 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 PRUNE2Q8WUY3 3088 aa26.4■■□□□ 1.82
RNF38-208ENST00000488058 TRANK1O15050 2925 aa26.39■■□□□ 1.82
RNF38-208ENST00000488058 A0A0U1RQF3 1178 aa26.39■■□□□ 1.82
RNF38-208ENST00000488058 XRCC6P12956 609 aaKnown RBP eCLIP26.39■■□□□ 1.82
RNF38-208ENST00000488058 CCT6AP40227 531 aaKnown RBP26.39■■□□□ 1.82
RNF38-208ENST00000488058 PHKA2P46019 1235 aa26.39■■□□□ 1.82
RNF38-208ENST00000488058 FXR2P51116 673 aaKnown RBP eCLIP26.39■■□□□ 1.82
RNF38-208ENST00000488058 HLA-CQ95604 372 aa26.39■■□□□ 1.82
RNF38-208ENST00000488058 NACC1Q96RE7 527 aa26.39■■□□□ 1.82
RNF38-208ENST00000488058 TMEM117Q9H0C3 514 aa26.39■■□□□ 1.82
RNF38-208ENST00000488058 TYW1Q9NV66 732 aaKnown RBP26.39■■□□□ 1.82
RNF38-208ENST00000488058 COG5Q9UP83 839 aa26.39■■□□□ 1.82
RNF38-208ENST00000488058 ATG2AQ2TAZ0 1938 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 RPA1P27694 616 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 TFDP1Q14186 410 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 MXD4Q14582 209 aaPredicted RBP26.38■■□□□ 1.81
RNF38-208ENST00000488058 LONRF3Q496Y0 759 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 RILPL1Q5EBL4 403 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 KLHL23Q8NBE8 558 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 ASAP3Q8TDY4 903 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 P2RX5Q93086 422 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 RAB34Q9BZG1 259 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 LMAN2LQ9H0V9 348 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 POLR3FQ9H1D9 316 aaPredicted RBP26.38■■□□□ 1.81
RNF38-208ENST00000488058 MINDY3Q9H8M7 445 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.38■■□□□ 1.81
RNF38-208ENST00000488058 AAASQ9NRG9 546 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 RNF19AQ9NV58 838 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 PLAGL2Q9UPG8 496 aa26.38■■□□□ 1.81
RNF38-208ENST00000488058 TCEAL5Q5H9L2 206 aa26.37■■□□□ 1.81
RNF38-208ENST00000488058 HELQQ8TDG4 1101 aa26.37■■□□□ 1.81
RNF38-208ENST00000488058 SYMPKQ92797 1274 aaKnown RBP26.37■■□□□ 1.81
RNF38-208ENST00000488058 CASD1Q96PB1 797 aa26.37■■□□□ 1.81
RNF38-208ENST00000488058 NSUN3Q9H649 340 aaKnown RBP26.37■■□□□ 1.81
RNF38-208ENST00000488058 AGPAT5Q9NUQ2 364 aa26.37■■□□□ 1.81
RNF38-208ENST00000488058 DBR1Q9UK59 544 aaKnown RBP26.37■■□□□ 1.81
RNF38-208ENST00000488058 PCDHB12Q9Y5F1 795 aa26.37■■□□□ 1.81
RNF38-208ENST00000488058 UNC80Q8N2C7 3258 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 ARHGEF35A5YM69 484 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 ERLIN2O94905 339 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 EOMESO95936 686 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 ITGB1P05556 798 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 CAPSQ13938 189 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 AAK1Q2M2I8 961 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 NAALADL2Q58DX5 795 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 CLLU1OSQ5K130 101 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 SNX29Q8TEQ0 813 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 GPRC5CQ9NQ84 441 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 FAM105AQ9NUU6 356 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 PLXNA4Q9HCM2 1894 aa26.36■■□□□ 1.81
RNF38-208ENST00000488058 INO80B-WBP1J3KQ70 363 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 LAD1O00515 517 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 SKIP12755 728 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 ATF7P17544 494 aaPredicted RBP26.35■■□□□ 1.81
RNF38-208ENST00000488058 ARL2P36404 184 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 CUL4AQ13619 759 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 EP400NLQ6ZTU2 488 aa26.35■■□□□ 1.81
RNF38-208ENST00000488058 ZNF598Q86UK7 904 aaKnown RBP26.35■■□□□ 1.81
RNF38-208ENST00000488058 THNSL1Q8IYQ7 743 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms