RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CD83Q01151 205 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 COL10A1Q03692 680 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 DHCR24Q15392 516 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 ZNF174Q15697 407 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 CXXC5Q7LFL8 322 aaKnown RBP5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 PTRH1Q86Y79 214 aaKnown RBP5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 THNSL2Q86YJ6 484 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 PASD1Q8IV76 773 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 ULK2Q8IYT8 1036 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 RPUSD2Q8IZ73 545 aaKnown RBP5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 CISD2Q8N5K1 135 aaKnown RBP5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 ATL2Q8NHH9 583 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 TTC1Q99614 292 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 PCIF1Q9H4Z3 704 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 AGO3Q9H9G7 860 aaKnown RBP5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 ATP23Q9Y6H3 246 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 A0A087X0B3 334 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 A0A0G2JNJ9 132 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 SLC12A8A0AV02 714 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 MAN2B1O00754 1011 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 HSP90B1P14625 803 aaKnown RBP5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 AOAHP28039 575 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 HGFACQ04756 655 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 TRIM68Q6AZZ1 485 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 LAIR1Q6GTX8 287 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 LRSAM1Q6UWE0 723 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 WDR48Q8TAF3 677 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 PUS7Q96PZ0 661 aaKnown RBP5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 BOCQ9BWV1 1114 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 Q9UFV3 132 aa5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 APOBEC2Q9Y235 224 aaKnown RBP5.18□□□□□ -1.58
HMGB1P36-201ENST00000487709 TMEM191CA6NGB0 347 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 CBX4O00257 560 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 KCNK3O14649 394 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 GLRX3O76003 335 aaKnown RBP5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 SLC25A3Q00325 362 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 RIN1Q13671 783 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 STILQ15468 1287 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 ORAI3Q9BRQ5 295 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 BTBD2Q9BX70 525 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 IFT22Q9H7X7 185 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 NRDE2Q9H7Z3 1164 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 PCDH12Q9NPG4 1184 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 UCKL1Q9NWZ5 548 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 BTBD7Q9P203 1132 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 SH3BP1Q9Y3L3 701 aa5.17□□□□□ -1.58
HMGB1P36-201ENST00000487709 PTPDC1A2A3K4 754 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 ALG1L2C9J202 215 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 ZNF561-AS1K7EIQ3 104 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 ZEB2O60315 1214 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 KRT37O76014 449 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 MPIG6BO95866 241 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 AMY2AP04746 511 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 AMY2BP19961 511 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 SCNN1GP51170 649 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 KPNA1P52294 538 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 LACTBP83111 547 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 IRF9Q00978 393 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 STRN3Q13033 797 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 MOGSQ13724 837 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 TMEM200BQ69YZ2 307 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 Q6ZRM9 215 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 RNF180Q86T96 592 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 NAF1Q96HR8 494 aaKnown RBP5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 AMNQ9BXJ7 453 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 GPRC5BQ9NZH0 403 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 B4GALT6Q9UBX8 382 aa5.16□□□□□ -1.58
HMGB1P36-201ENST00000487709 A0A1W2PRX2 142 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 PEX11BO96011 259 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 F2P00734 622 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 C4BPAP04003 597 aaKnown RBP5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 ECE1P42892 770 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 FAPQ12884 760 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 CNGB1Q14028 1251 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 KANK2Q63ZY3 851 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 GRAMD4Q6IC98 578 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 OVCH1Q7RTY7 1134 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 OSTM1Q86WC4 334 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 E2F7Q96AV8 911 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 OR10A5Q9H207 317 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 CBLCQ9ULV8 474 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 ATP8A1Q9Y2Q0 1164 aa5.15□□□□□ -1.59
HMGB1P36-201ENST00000487709 CLASP2O75122 1294 aaKnown RBP5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 RAB11FIP3O75154 756 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 ULK1O75385 1050 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 NUDT3O95989 172 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 MMEP08473 750 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 LSSP48449 732 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 JAM2P57087 298 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 SAFB2Q14151 953 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 ACAP1Q15027 740 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 ABHD17CQ6PCB6 329 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 ZZZ3Q8IYH5 903 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 ANKRD35Q8N283 1001 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 UBR7Q8N806 425 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 GPR150Q8NGU9 434 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 MPHOSPH9Q99550 1183 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 ACSS2Q9NR19 701 aa5.14□□□□□ -1.59
HMGB1P36-201ENST00000487709 FAM20BO75063 409 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 CYP17A1P05093 508 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms