RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 ZNF318Q5VUA4 2279 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 SMIM35A0A1B0GVV1 85 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 ARHGEF35A5YM69 484 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 PRR33A8MZF0 331 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 NBNO60934 754 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 EYA4O95677 639 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 IL9P15248 144 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 PLCG1P19174 1290 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 KCNA5P22460 613 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 TMOD1P28289 359 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 RFC5P40937 340 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 ERVK-21P61565 698 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 LEXMQ3ZCV2 418 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 TPRNQ4KMQ1 711 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 RRAGBQ5VZM2 374 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 RESP18Q5W5W9 173 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 TAF2Q6P1X5 1199 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 LRRC71Q8N4P6 559 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 CCDC155Q8N6L0 562 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 DNAJB3Q8WWF6 145 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 SLC7A3Q8WY07 619 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 WNT8BQ93098 351 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 TGS1Q96RS0 853 aaKnown RBP11.88□□□□□ -0.51
TOP3B-216ENST00000487485 RAD9AQ99638 391 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 JPH2Q9BR39 696 aaPredicted RBP11.88□□□□□ -0.51
TOP3B-216ENST00000487485 FAM49AQ9H0Q0 323 aaPredicted RBP11.88□□□□□ -0.51
TOP3B-216ENST00000487485 BHMT2Q9H2M3 363 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 DHX33Q9H6R0 707 aaKnown RBP11.88□□□□□ -0.51
TOP3B-216ENST00000487485 FAM13BQ9NYF5 915 aa11.88□□□□□ -0.51
TOP3B-216ENST00000487485 COL4A4P53420 1690 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-216ENST00000487485 TANC1Q9C0D5 1861 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 A0A087X0B3 334 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 IGKV6-21A0A0C4DH24 114 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 LINC01553A4QN01 128 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 DGAT1O75907 488 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 GJB5O95377 273 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 CKBP12277 381 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 SELPP16109 830 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 CMA1P23946 247 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 SSTR3P32745 418 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-216ENST00000487485 THPOP40225 353 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 DNM2P50570 870 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 POLGP54098 1239 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-216ENST00000487485 CSPP1Q1MSJ5 1256 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 TRIM71Q2Q1W2 868 aaKnown RBP11.87□□□□□ -0.51
TOP3B-216ENST00000487485 FAM117BQ6P1L5 589 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 PADI6Q6TGC4 694 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 CCDC73Q6ZRK6 1079 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 LRRC8DQ7L1W4 858 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 RSPH3Q86UC2 560 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 KIAA0319LQ8IZA0 1049 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 NME8Q8N427 588 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 LINC01465Q8N7H1 131 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 PDILTQ8N807 584 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 SYT2Q8N9I0 419 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-216ENST00000487485 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-216ENST00000487485 BLOC1S4Q9NUP1 217 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 MYH11P35749 1972 aa11.87□□□□□ -0.51
TOP3B-216ENST00000487485 SIP14410 1827 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 PTPRZ1P23471 2315 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-216ENST00000487485 A0A1B0GVL5 298 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 A0A1W2PQ27 194 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 A0A1W2PQ64 194 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 A0A1W2PQD8 194 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 USO1O60763 962 aaKnown RBP11.86□□□□□ -0.51
TOP3B-216ENST00000487485 CXCL10P02778 98 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 RPLP2P05387 115 aaKnown RBP11.86□□□□□ -0.51
TOP3B-216ENST00000487485 SSBP05455 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
TOP3B-216ENST00000487485 PLA2G4BP0C869 781 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 STAT6P42226 847 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 MRE11P49959 708 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 CLCN3P51790 818 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 TMEM62Q0P6H9 643 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-216ENST00000487485 DHX8Q14562 1220 aaKnown RBP11.86□□□□□ -0.51
TOP3B-216ENST00000487485 EMC2Q15006 297 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 ZNF618Q5T7W0 954 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 PTCRAQ6ISU1 281 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-216ENST00000487485 RINT1Q6NUQ1 792 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 CNKSR3Q6P9H4 555 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 MAEAQ7L5Y9 396 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 RPAINQ86UA6 219 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 LRRC15Q8TF66 581 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 RAD54LQ92698 747 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 MTRQ99707 1265 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 ATP6V0A4Q9HBG4 840 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 XPNPEP1Q9NQW7 623 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 SUCLA2Q9P2R7 463 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-216ENST00000487485 STK17AQ9UEE5 414 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 AKT3Q9Y243 479 aa11.86□□□□□ -0.51
TOP3B-216ENST00000487485 ZDBF2Q9HCK1 2354 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 ABHD14A-ACY1A0A1B0GW23 586 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 GRXCR2A6NFK2 248 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 RSPH10B2B2RC85 870 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 POLR2DO15514 142 aaKnown RBP11.85□□□□□ -0.51
TOP3B-216ENST00000487485 GAS2O43903 313 aaKnown RBP11.85□□□□□ -0.51
TOP3B-216ENST00000487485 CAND2O75155 1236 aa11.85□□□□□ -0.51
TOP3B-216ENST00000487485 VTNP04004 478 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms