RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 MCM7P33993 719 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 KCNQ1P51787 676 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 POLGP54098 1239 aaPredicted RBP13.91□□□□□ -0.18
ITSN1-229ENST00000487427 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 ECHDC2Q86YB7 292 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 KLHL23Q8NBE8 558 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 SPPL3Q8TCT6 385 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 NEK9Q8TD19 979 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 PRPF31Q8WWY3 499 aaKnown RBP13.91□□□□□ -0.18
ITSN1-229ENST00000487427 PSPC1Q8WXF1 523 aaKnown RBP13.91□□□□□ -0.18
ITSN1-229ENST00000487427 TMEM117Q9H0C3 514 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 UBE2ZQ9H832 354 aaPredicted RBP13.91□□□□□ -0.18
ITSN1-229ENST00000487427 ALG13Q9NP73 1137 aaKnown RBP13.91□□□□□ -0.18
ITSN1-229ENST00000487427 ANKEF1Q9NU02 776 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 PCDHB12Q9Y5F1 795 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 EVPLQ92817 2033 aa13.91□□□□□ -0.18
ITSN1-229ENST00000487427 ASAP2O43150 1006 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 ITGB1P05556 798 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 FGFR1P11362 822 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 XRCC6P12956 609 aaKnown RBP eCLIP13.9□□□□□ -0.18
ITSN1-229ENST00000487427 ORC2Q13416 577 aaPredicted RBP13.9□□□□□ -0.18
ITSN1-229ENST00000487427 GNL2Q13823 731 aaKnown RBP13.9□□□□□ -0.18
ITSN1-229ENST00000487427 TCEAL5Q5H9L2 206 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 NOSTRINQ8IVI9 506 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 KSR1Q8IVT5 923 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 TCP11Q8WWU5 503 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 TMEM143Q96AN5 459 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 UHRF1Q96T88 793 aaPredicted RBP13.9□□□□□ -0.18
ITSN1-229ENST00000487427 TRAIPQ9BWF2 469 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 TMEM60Q9H2L4 133 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 IFT122Q9HBG6 1241 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
ITSN1-229ENST00000487427 COL4A3BPQ9Y5P4 624 aa13.9□□□□□ -0.18
ITSN1-229ENST00000487427 TNFRSF10AO00220 468 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 SRGAP2CP0DJJ0 459 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 SKIP12755 728 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 KCNA5P22460 613 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 TRAPPC10P48553 1259 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 LAMTOR4Q0VGL1 99 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 CAMK1Q14012 370 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 COL19A1Q14993 1142 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 EMC2Q15006 297 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 ZNF174Q15697 407 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 CSPP1Q1MSJ5 1256 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 LEXMQ3ZCV2 418 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 SPOUT1Q5T280 376 aaKnown RBP13.89□□□□□ -0.19
ITSN1-229ENST00000487427 CATSPER4Q7RTX7 472 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 SRGAP1Q7Z6B7 1085 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 ZNF598Q86UK7 904 aaKnown RBP13.89□□□□□ -0.19
ITSN1-229ENST00000487427 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 PABPC5Q96DU9 382 aaKnown RBP13.89□□□□□ -0.19
ITSN1-229ENST00000487427 CASD1Q96PB1 797 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 KIF3AQ9Y496 699 aa13.89□□□□□ -0.19
ITSN1-229ENST00000487427 U2AF2P26368 475 aaKnown RBP eCLIP13.88□□□□□ -0.19
ITSN1-229ENST00000487427 MXD4Q14582 209 aaPredicted RBP13.88□□□□□ -0.19
ITSN1-229ENST00000487427 FERMT3Q86UX7 667 aa13.88□□□□□ -0.19
ITSN1-229ENST00000487427 RNF169Q8NCN4 708 aa13.88□□□□□ -0.19
ITSN1-229ENST00000487427 CWH43Q9H720 699 aa13.88□□□□□ -0.19
ITSN1-229ENST00000487427 RNF19AQ9NV58 838 aa13.88□□□□□ -0.19
ITSN1-229ENST00000487427 POTEMA6NI47 508 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 ZNF623O75123 536 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 DGAT1O75907 488 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 OR52Z1P0C646 297 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 SPATA31C1P0DKV0 1188 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 LAG3P18627 525 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 DNAJB1P25685 340 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 TECP42680 631 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 PHKA2P46019 1235 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 MCM2P49736 904 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 UBE3AQ05086 875 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 POU5F1BQ06416 359 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 CTC1Q2NKJ3 1217 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 PUS10Q3MIT2 529 aaKnown RBP13.87□□□□□ -0.19
ITSN1-229ENST00000487427 TTC38Q5R3I4 469 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 TWF2Q6IBS0 349 aaKnown RBP13.87□□□□□ -0.19
ITSN1-229ENST00000487427 LRRC55Q6ZSA7 311 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 COLGALT1Q8NBJ5 622 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 RNF149Q8NC42 400 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 PIGOQ8TEQ8 1089 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 POF1BQ8WVV4 589 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 RSPH1Q8WYR4 309 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 PPP2R3CQ969Q6 453 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 CCDC43Q96MW1 224 aaKnown RBP13.87□□□□□ -0.19
ITSN1-229ENST00000487427 MTRQ99707 1265 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 XPNPEP1Q9NQW7 623 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 BMP2KQ9NSY1 1161 aaPredicted RBP13.87□□□□□ -0.19
ITSN1-229ENST00000487427 NOL7Q9UMY1 257 aaKnown RBP13.87□□□□□ -0.19
ITSN1-229ENST00000487427 PIN4Q9Y237 131 aaKnown RBP13.87□□□□□ -0.19
ITSN1-229ENST00000487427 VCANP13611 3396 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 REV3LO60673 3130 aa13.87□□□□□ -0.19
ITSN1-229ENST00000487427 NCOR1O75376 2440 aa13.86□□□□□ -0.19
ITSN1-229ENST00000487427 COL4A4P53420 1690 aaPredicted RBP13.86□□□□□ -0.19
ITSN1-229ENST00000487427 FGF18O76093 207 aa13.86□□□□□ -0.19
ITSN1-229ENST00000487427 ATF7P17544 494 aaPredicted RBP13.86□□□□□ -0.19
ITSN1-229ENST00000487427 RARRES1P49788 294 aa13.86□□□□□ -0.19
ITSN1-229ENST00000487427 RAB27AP51159 221 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms