RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 VEZTQ9HBM0 779 aa13.4□□□□□ -0.26
PTCD2-204ENST00000486995 KCNH7Q9NS40 1196 aa13.4□□□□□ -0.26
PTCD2-204ENST00000486995 FEZ2Q9UHY8 353 aaPredicted RBP13.4□□□□□ -0.26
PTCD2-204ENST00000486995 ZNF536O15090 1300 aa13.4□□□□□ -0.27
PTCD2-204ENST00000486995 TRIM66O15016 1216 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 DHX15O43143 795 aaKnown RBP13.39□□□□□ -0.27
PTCD2-204ENST00000486995 BUB1BO60566 1050 aaPredicted RBP13.39□□□□□ -0.27
PTCD2-204ENST00000486995 BCRP11274 1271 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 ITGA4P13612 1032 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 HSPA9P38646 679 aaKnown RBP13.39□□□□□ -0.27
PTCD2-204ENST00000486995 SKOR1P84550 965 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 MYL7Q01449 175 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 PPATQ06203 517 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 GRIPAP1Q4V328 841 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 MAEAQ7L5Y9 396 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 OGFOD1Q8N543 542 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 DDX47Q9H0S4 455 aaKnown RBP13.39□□□□□ -0.27
PTCD2-204ENST00000486995 PKD2L1Q9P0L9 805 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 NCANO14594 1321 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 GRIN2DO15399 1336 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 IGSF9BQ9UPX0 1349 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 KRIT1O00522 736 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 INPP5BP32019 993 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 DLG4P78352 724 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 DNAJC21Q5F1R6 531 aaKnown RBP13.39□□□□□ -0.27
PTCD2-204ENST00000486995 KCTD16Q68DU8 428 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 MIER3Q7Z3K6 550 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 SH2D3CQ8N5H7 860 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 IL31RAQ8NI17 732 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 TAS2R14Q9NYV8 317 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 AMFRQ9UKV5 643 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 PPP1R9AQ9ULJ8 1098 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 RPTORQ8N122 1335 aa13.39□□□□□ -0.27
PTCD2-204ENST00000486995 TISP43B9A030 160 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 CCDC188H7C350 402 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 K7ENM7 598 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 TULP1O00294 542 aaPredicted RBP13.38□□□□□ -0.27
PTCD2-204ENST00000486995 FOXN3O00409 490 aaPredicted RBP13.38□□□□□ -0.27
PTCD2-204ENST00000486995 ICAM1P05362 532 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 ABCB4P21439 1286 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 CUL1Q13616 776 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 ARHGAP44Q17R89 818 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 FKBP1CQ5VVH2 108 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 DDX42Q86XP3 938 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTCD2-204ENST00000486995 PALB2Q86YC2 1186 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 PGAP2Q9UHJ9 254 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 ZHX2Q9Y6X8 837 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 NFIBO00712 420 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 EIF3HO15372 352 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTCD2-204ENST00000486995 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
PTCD2-204ENST00000486995 CCDC172P0C7W6 258 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 GNGT1P63211 74 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 ITGB3BPQ13352 177 aaPredicted RBP13.38□□□□□ -0.27
PTCD2-204ENST00000486995 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
PTCD2-204ENST00000486995 KIF22Q14807 665 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 TTC19Q6DKK2 380 aaPredicted RBP13.38□□□□□ -0.27
PTCD2-204ENST00000486995 CLEC4DQ8WXI8 215 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 ARHGEF26Q96DR7 871 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 PCIF1Q9H4Z3 704 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 DAAM1Q9Y4D1 1078 aa13.38□□□□□ -0.27
PTCD2-204ENST00000486995 DDX3YO15523 660 aaKnown RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 LRRN2O75325 713 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 TNFAIP3P21580 790 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 HLTFQ14527 1009 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 KCTD19Q17RG1 926 aaPredicted RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 FMNL3Q8IVF7 1028 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 TMEM174Q8WUU8 243 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 THAP2Q9H0W7 228 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 NEUROG2Q9H2A3 272 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 LARSQ9P2J5 1176 aaKnown RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 AMACRQ9UHK6 382 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 TTC7AQ9ULT0 858 aaPredicted RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 EMSYQ7Z589 1322 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 MAPTP10636 758 aaKnown RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 RARRES1P49788 294 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 MAP3K10Q02779 954 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 PPP3CAQ08209 521 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 SKIDA1Q1XH10 827 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 EMC10Q5UCC4 262 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 DCAF12L1Q5VU92 463 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 FAM83AQ86UY5 434 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 LARGE2Q8N3Y3 721 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 C1orf131Q8NDD1 294 aaKnown RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 TMEM206Q9H813 350 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 AGO4Q9HCK5 861 aaKnown RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 ZNF277Q9NRM2 450 aaPredicted RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
PTCD2-204ENST00000486995 PLAAQ9Y263 795 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
PTCD2-204ENST00000486995 FAM170AA1A519 330 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 KRT13P13646 458 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 RFX1P22670 979 aa13.36□□□□□ -0.27
PTCD2-204ENST00000486995 MRPS9P82933 396 aaKnown RBP13.36□□□□□ -0.27
PTCD2-204ENST00000486995 POU5F1Q01860 360 aaKnown RBP13.36□□□□□ -0.27
PTCD2-204ENST00000486995 TKFCQ3LXA3 575 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms