RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 ATP8B1O43520 1251 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 ECE2O60344 883 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 URI1O94763 535 aaPredicted RBP7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 FOSP01100 380 aaPredicted RBP7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 KRT9P35527 623 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 SLC1A4P43007 532 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 TNNI2P48788 182 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 MMP14P50281 582 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 ICA1Q05084 483 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 PPP2R3AQ06190 1150 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 STK4Q13043 487 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 MTF1Q14872 753 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 FBXO38Q6PIJ6 1188 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 BTNL9Q6UXG8 535 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 MAP4K3Q8IVH8 894 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 SLFN12Q8IYM2 578 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 CCDC170Q8IYT3 715 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 KIAA0895Q8NCT3 520 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 SNX29Q8TEQ0 813 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 CRYGNQ8WXF5 182 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 UBXN4Q92575 508 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 CNOT6LQ96LI5 555 aaKnown RBP7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 NSUN5Q96P11 429 aaKnown RBP7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 WDR24Q96S15 920 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 HINFPQ9BQA5 517 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 SYT17Q9BSW7 474 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 DESI2Q9BSY9 194 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 KCNMB3Q9NPA1 279 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 FAM53CQ9NYF3 392 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 STOML1Q9UBI4 398 aa7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 HERC5Q9UII4 1024 aaKnown RBP7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 LUC7L2Q9Y383 392 aaKnown RBP7.83□□□□□ -1.16
SMARCAL1-212ENST00000486983 PITPNM2Q9BZ72 1349 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 TTC26A0AVF1 554 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 MYMKA6NI61 221 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 USP17L10C9JJH3 530 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 KIF20AO95235 890 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 NDUFA10O95299 355 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 EEF2P13639 858 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 HNRNPH3P31942 346 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 EIF6P56537 245 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 FAM193AP78312 1265 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 KRT83P78385 493 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 ZBED6P86452 979 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 NAA30Q147X3 362 aaPredicted RBP7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 CDC37Q16543 378 aaPredicted RBP7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 UBE2SQ16763 222 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 QRICH1Q2TAL8 776 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 Q4G0T1 1027 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 ZCWPW2Q504Y3 356 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 ARHGAP29Q52LW3 1261 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 MIIPQ5JXC2 388 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 FKBP15Q5T1M5 1219 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 HAUS3Q68CZ6 603 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 SLFN13Q68D06 897 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 ANKRD40Q6AI12 368 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 TTBK2Q6IQ55 1244 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 RSRC2Q7L4I2 434 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 CCDC84Q86UT8 332 aaPredicted RBP7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 ARMC10Q8N2F6 343 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 CEP112Q8N8E3 955 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 RABGGTAQ92696 567 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 HAS1Q92839 578 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 ZNF622Q969S3 477 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 MXD3Q9BW11 206 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 AMNQ9BXJ7 453 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 ANO3Q9BYT9 981 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 EDEM3Q9BZQ6 932 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 HAUS4Q9H6D7 363 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 DBNDD1Q9H9R9 158 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 ZNHIT6Q9NWK9 470 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 TRIM33Q9UPN9 1127 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 MAPK8IP1Q9UQF2 711 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 ARFGEF1Q9Y6D6 1849 aa7.82□□□□□ -1.16
SMARCAL1-212ENST00000486983 PSME4Q14997 1843 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 FRMD3A2A2Y4 597 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 CTAGE9A4FU28 777 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 DDTLA6NHG4 134 aaPredicted RBP7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 B4DLN1 442 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 EIF3CLB5ME19 914 aaKnown RBP7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 PSMD14O00487 310 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 MEIS2O14770 477 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 OPLAHO14841 1288 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 DHX15O43143 795 aaKnown RBP7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 WISP1O95388 367 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 GNA14O95837 355 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 EGFRP00533 1210 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 TUBBP07437 444 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 FCER1AP12319 257 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 CIITAP33076 1130 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 CYLC1P35663 651 aaPredicted RBP7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 SREBF1P36956 1147 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 ARHGAP25P42331 645 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 MAN2A1Q16706 1144 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 WHAMMP3Q1A5X7 153 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 TMEM132AQ24JP5 1023 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 ABCB5Q2M3G0 1257 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 ERCC6LQ2NKX8 1250 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 LRRC55Q6ZSA7 311 aa7.81□□□□□ -1.16
SMARCAL1-212ENST00000486983 KCTD1Q719H9 257 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms