RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 TCP11X1B4DZS4 312 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 ZBTB39O15060 712 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 BMP3P12645 472 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 KRT5P13647 590 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 CETN1Q12798 172 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 NAB2Q15742 525 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 C4orf32Q8N8J7 132 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 NEUROG2Q9H2A3 272 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 MAGEF1Q9HAY2 307 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 GYS1P13807 737 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 PMS2P54278 862 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 IFI35P80217 286 aaPredicted RBP13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 SETDB1Q15047 1291 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 SEL1L2Q5TEA6 688 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 TAOK1Q7L7X3 1001 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 SAAL1Q96ER3 474 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 INTUQ9ULD6 942 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 COL4A1P02462 1669 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 TAF1P21675 1872 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 TESPA1A2RU30 521 aaPredicted RBP13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 K7ENM7 598 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 IGF2BP3O00425 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 C21orf2O43822 256 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 SUN1O94901 812 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 ATP6V1G2O95670 118 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 PRPHP41219 470 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 KCNJ1P48048 391 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 LONRF1Q17RB8 773 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 CYP4F22Q6NT55 531 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 PPM1KQ8N3J5 372 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 EPS8L3Q8TE67 593 aaKnown RBP13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 HOOK2Q96ED9 719 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 DDX23Q9BUQ8 820 aaKnown RBP13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 LRRC4CQ9HCJ2 640 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 OSGEPQ9NPF4 335 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 RIC8AQ9NPQ8 531 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 FAM114A2Q9NRY5 505 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 HOMER3Q9NSC5 361 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 KLHL14Q9P2G3 628 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 TJP1Q07157 1748 aa13.31□□□□□ -0.28
SHROOM3-208ENST00000486758 AFPP02771 609 aaKnown RBP13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 SHBGP04278 402 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 CASP4P49662 377 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 GSTA5Q7RTV2 222 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 FAM186BQ8IYM0 893 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 PBKQ96KB5 322 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 MTFR1LQ9H019 292 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 GDF3Q9NR23 364 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 TRAPPC3O43617 180 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 MED24O75448 989 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 CAPN15O75808 1086 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 UBOX5O94941 541 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 FNTAP49354 379 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 ECM1Q16610 540 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 SYCE1Q8N0S2 351 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 IQCDQ96DY2 449 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 MMTAG2Q9BU76 263 aaKnown RBP13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 TRIM7Q9C029 511 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 ETNK1Q9HBU6 452 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 PI4KBQ9UBF8 816 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 DDTLA6NHG4 134 aaPredicted RBP13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 DLATP10515 647 aaKnown RBP13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 ZBTB16Q05516 673 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 KCNA1Q09470 495 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 BARGINQ6ZT62 677 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 TRPM8Q7Z2W7 1104 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 COA1Q9GZY4 146 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 BCAS3Q9H6U6 928 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 PLCB1Q9NQ66 1216 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 ABCF3Q9NUQ8 709 aa13.3□□□□□ -0.28
SHROOM3-208ENST00000486758 A0A1W2PQJ5 194 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 PRLRP16471 622 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 POLE2P56282 527 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 KCNJ2P63252 427 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 SYDE2Q5VT97 1194 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 ARMC2Q8NEN0 867 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 DYDC2Q96IM9 177 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 STMN4Q9H169 189 aaPredicted RBP13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 ARHGEF10LQ9HCE6 1279 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 MCM8Q9UJA3 840 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 SIK3Q9Y2K2 1263 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 PVALEFA0A1B0GWK0 134 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 SSU72P8A0A1W2PR75 194 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 FECHP22830 423 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 ALDH1B1P30837 517 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 ECE1P42892 770 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 PPP4CP60510 307 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 DLGAP5Q15398 846 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 MUM1Q2TAK8 710 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 SRRM1Q8IYB3 904 aaKnown RBP13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 FBXO25Q8TCJ0 367 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 WDR91A4D1P6 747 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 FOXO6A8MYZ6 492 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 GSCP56915 257 aaPredicted RBP13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 AADACL2Q6P093 401 aa13.29□□□□□ -0.28
SHROOM3-208ENST00000486758 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms