RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 DGCR2P98153 550 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 TMEM132BQ14DG7 1078 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 ABHD17CQ6PCB6 329 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 GPR135Q8IZ08 494 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 RPUSD2Q8IZ73 545 aaKnown RBP6.26□□□□□ -1.41
SMC4-218ENST00000486711 AMER2Q8N7J2 671 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 CACTINQ8WUQ7 758 aaKnown RBP6.26□□□□□ -1.41
SMC4-218ENST00000486711 LPPQ93052 612 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 CEP89Q96ST8 783 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 TTC1Q99614 292 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 METTL14Q9HCE5 456 aaKnown RBP6.26□□□□□ -1.41
SMC4-218ENST00000486711 TYW1Q9NV66 732 aaKnown RBP6.26□□□□□ -1.41
SMC4-218ENST00000486711 DDX56Q9NY93 547 aaKnown RBP6.26□□□□□ -1.41
SMC4-218ENST00000486711 VWA7Q9Y334 891 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 FAM83GA6ND36 823 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 CYP27B1O15528 508 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 KCNA6P17658 529 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 IRF9Q00978 393 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 TMEM177Q53S58 311 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 CATSPEREQ5SY80 951 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 IGFL4Q6B9Z1 124 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 SGMS1Q86VZ5 419 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 D2HGDHQ8N465 521 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 C2orf69Q8N8R5 385 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 ORAI3Q9BRQ5 295 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 FAM126AQ9BYI3 521 aaPredicted RBP6.25□□□□□ -1.41
SMC4-218ENST00000486711 IFT22Q9H7X7 185 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 GIT1Q9Y2X7 761 aa6.25□□□□□ -1.41
SMC4-218ENST00000486711 WDR33Q9C0J8 1336 aaKnown RBP6.25□□□□□ -1.41
SMC4-218ENST00000486711 CAPN14A8MX76 684 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 CBX4O00257 560 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 CDKN1CP49918 316 aaPredicted RBP6.24□□□□□ -1.41
SMC4-218ENST00000486711 SESN2P58004 480 aaPredicted RBP6.24□□□□□ -1.41
SMC4-218ENST00000486711 IL2P60568 153 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 PURAQ00577 322 aaKnown RBP6.24□□□□□ -1.41
SMC4-218ENST00000486711 ALDH6A1Q02252 535 aaKnown RBP6.24□□□□□ -1.41
SMC4-218ENST00000486711 RIN1Q13671 783 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 SEPT7Q16181 437 aaKnown RBP6.24□□□□□ -1.41
SMC4-218ENST00000486711 KLHDC10Q6PID8 442 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 STRA8Q7Z7C7 330 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 CHST14Q8NCH0 376 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 WDR66Q8TBY9 1149 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 ERCC4Q92889 916 aaPredicted RBP6.24□□□□□ -1.41
SMC4-218ENST00000486711 E2F7Q96AV8 911 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 MPHOSPH9Q99550 1183 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 FOXB1Q99853 325 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 BOCQ9BWV1 1114 aa6.24□□□□□ -1.41
SMC4-218ENST00000486711 CTDP1Q9Y5B0 961 aaPredicted RBP6.24□□□□□ -1.41
SMC4-218ENST00000486711 ZEB2O60315 1214 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 F2P00734 622 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 PDGFRBP09619 1106 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 POU3F3P20264 500 aaPredicted RBP6.23□□□□□ -1.41
SMC4-218ENST00000486711 EVA1CP58658 441 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 OCRLQ01968 901 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 TUBA3CQ13748 450 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 ARHGAP44Q17R89 818 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 RNF219Q5W0B1 726 aaPredicted RBP6.23□□□□□ -1.41
SMC4-218ENST00000486711 CC2D1AQ6P1N0 951 aaPredicted RBP6.23□□□□□ -1.41
SMC4-218ENST00000486711 TUBA3EQ6PEY2 450 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 C11orf74Q86VG3 221 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 THEMISQ8N1K5 641 aaPredicted RBP6.23□□□□□ -1.41
SMC4-218ENST00000486711 RABGGTAQ92696 567 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 TMEM176AQ96HP8 235 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 TRIM8Q9BZR9 551 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 ZNF703Q9H7S9 590 aaPredicted RBP6.23□□□□□ -1.41
SMC4-218ENST00000486711 B4GALT6Q9UBX8 382 aa6.23□□□□□ -1.41
SMC4-218ENST00000486711 APOBEC2Q9Y235 224 aaKnown RBP6.23□□□□□ -1.41
SMC4-218ENST00000486711 ZNF891A8MT65 544 aaPredicted RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 H2AFYO75367 372 aaKnown RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 EYA4O95677 639 aa6.22□□□□□ -1.41
SMC4-218ENST00000486711 S100BP04271 92 aaPredicted RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 FNTBP49356 437 aa6.22□□□□□ -1.41
SMC4-218ENST00000486711 ADAM15Q13444 863 aa6.22□□□□□ -1.41
SMC4-218ENST00000486711 FAM50AQ14320 339 aaKnown RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 OTOP1Q7RTM1 612 aa6.22□□□□□ -1.41
SMC4-218ENST00000486711 RTN4RL1Q86UN2 441 aaPredicted RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 BCL6BQ8N143 479 aaPredicted RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 NXPE1Q8N323 547 aa6.22□□□□□ -1.41
SMC4-218ENST00000486711 FOXRED1Q96CU9 486 aaPredicted RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 SLC7A6OSQ96CW6 309 aaPredicted RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 CHFRQ96EP1 664 aa6.22□□□□□ -1.41
SMC4-218ENST00000486711 AGO3Q9H9G7 860 aaKnown RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 SAE1Q9UBE0 346 aaPredicted RBP6.22□□□□□ -1.41
SMC4-218ENST00000486711 A0A1W2PRX2 142 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 PTPDC1A2A3K4 754 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 ADH4P08319 380 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 ZBTB48P10074 688 aaPredicted RBP6.21□□□□□ -1.42
SMC4-218ENST00000486711 GUCY2FP51841 1108 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 EXOSC10Q01780 885 aaKnown RBP6.21□□□□□ -1.42
SMC4-218ENST00000486711 DPTQ07507 201 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 STAT4Q14765 748 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 PLEKHG6Q3KR16 790 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 NECAB2Q7Z6G3 386 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 SPATS2Q86XZ4 545 aaKnown RBP6.21□□□□□ -1.42
SMC4-218ENST00000486711 ANKRD35Q8N283 1001 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 ZNF483Q8TF39 744 aaPredicted RBP6.21□□□□□ -1.42
SMC4-218ENST00000486711 GFM2Q969S9 779 aaKnown RBP6.21□□□□□ -1.42
SMC4-218ENST00000486711 PARPBPQ9NWS1 579 aa6.21□□□□□ -1.42
SMC4-218ENST00000486711 H7C1D1 291 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms