RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 SRGAP1Q7Z6B7 1085 aa20.22■□□□□ 0.83
COL1A1-207ENST00000486572 ASAP3Q8TDY4 903 aa20.22■□□□□ 0.83
COL1A1-207ENST00000486572 RC3H2Q9HBD1 1191 aaKnown RBP20.22■□□□□ 0.83
COL1A1-207ENST00000486572 LRFN2Q9ULH4 789 aa20.22■□□□□ 0.83
COL1A1-207ENST00000486572 DNM3Q9UQ16 869 aa20.22■□□□□ 0.83
COL1A1-207ENST00000486572 ADGRA3Q8IWK6 1321 aa20.22■□□□□ 0.83
COL1A1-207ENST00000486572 DGKIO75912 1065 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 EYA4O95677 639 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 FOSL2P15408 326 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 CYP11B2P19099 503 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 IBSPP21815 317 aaPredicted RBP20.21■□□□□ 0.83
COL1A1-207ENST00000486572 GLRA2P23416 452 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 LONP1P36776 959 aaKnown RBP20.21■□□□□ 0.83
COL1A1-207ENST00000486572 CAPSQ13938 189 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 PTPAQ15257 358 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 ZRSR1Q15695 479 aaKnown RBP20.21■□□□□ 0.83
COL1A1-207ENST00000486572 HYIQ5T013 277 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 MAEAQ7L5Y9 396 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 CATSPER4Q7RTX7 472 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 KCTD17Q8N5Z5 321 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 ARNTL2Q8WYA1 636 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 TGS1Q96RS0 853 aaKnown RBP20.21■□□□□ 0.83
COL1A1-207ENST00000486572 GAS2L1Q99501 681 aaPredicted RBP20.21■□□□□ 0.83
COL1A1-207ENST00000486572 NT5C3AQ9H0P0 336 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 CERS4Q9HA82 394 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 GPRC5CQ9NQ84 441 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 CHST12Q9NRB3 414 aa20.21■□□□□ 0.83
COL1A1-207ENST00000486572 CDH23Q9H251 3354 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 E9PMD0 336 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 SLC26A4O43511 780 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 POU5F1BQ06416 359 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 FAM102BQ5T8I3 360 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 SPRED2Q7Z698 418 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 CABP7Q86V35 215 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 ZNF689Q96CS4 500 aaPredicted RBP20.2■□□□□ 0.82
COL1A1-207ENST00000486572 CDK5RAP3Q96JB5 506 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 MINDY3Q9H8M7 445 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 DACT1Q9NYF0 836 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 PIN4Q9Y237 131 aaKnown RBP20.2■□□□□ 0.82
COL1A1-207ENST00000486572 PCDHB7Q9Y5E2 793 aa20.2■□□□□ 0.82
COL1A1-207ENST00000486572 ZSCAN22P10073 491 aaPredicted RBP20.19■□□□□ 0.82
COL1A1-207ENST00000486572 UBA7P41226 1012 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 PTENP60484 403 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 ERVK-21P61565 698 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 FAM189BP81408 668 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 CEBPZQ03701 1054 aaKnown RBP20.19■□□□□ 0.82
COL1A1-207ENST00000486572 GRIN1Q05586 938 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 KCNK18Q7Z418 384 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 IFNLR1Q8IU57 520 aaPredicted RBP20.19■□□□□ 0.82
COL1A1-207ENST00000486572 FIBCD1Q8N539 461 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 PNMA5Q96PV4 448 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 USP28Q96RU2 1077 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 NFKBIZQ9BYH8 718 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 ELAC1Q9H777 363 aaKnown RBP20.19■□□□□ 0.82
COL1A1-207ENST00000486572 AGPAT5Q9NUQ2 364 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 TMEM161AQ9NX61 479 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 MTUS1Q9ULD2 1270 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 MYH15Q9Y2K3 1946 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 CHD7Q9P2D1 2997 aa20.19■□□□□ 0.82
COL1A1-207ENST00000486572 MARCKSP29966 332 aaPredicted RBP20.18■□□□□ 0.82
COL1A1-207ENST00000486572 GRB10Q13322 594 aa20.18■□□□□ 0.82
COL1A1-207ENST00000486572 BTG3Q14201 252 aaPredicted RBP20.18■□□□□ 0.82
COL1A1-207ENST00000486572 PCBP1Q15365 356 aaKnown RBP eCLIP20.18■□□□□ 0.82
COL1A1-207ENST00000486572 TMEM119Q4V9L6 283 aa20.18■□□□□ 0.82
COL1A1-207ENST00000486572 FOXD4L5Q5VV16 416 aaPredicted RBP20.18■□□□□ 0.82
COL1A1-207ENST00000486572 CMTR2Q8IYT2 770 aaKnown RBP20.18■□□□□ 0.82
COL1A1-207ENST00000486572 FOXD4L4Q8WXT5 416 aaPredicted RBP20.18■□□□□ 0.82
COL1A1-207ENST00000486572 CALML4Q96GE6 196 aa20.18■□□□□ 0.82
COL1A1-207ENST00000486572 SAMD11Q96NU1 681 aa20.18■□□□□ 0.82
COL1A1-207ENST00000486572 FBXO2Q9UK22 296 aaPredicted RBP20.18■□□□□ 0.82
COL1A1-207ENST00000486572 MORC2Q9Y6X9 1032 aaPredicted RBP20.18■□□□□ 0.82
COL1A1-207ENST00000486572 COL4A4P53420 1690 aaPredicted RBP20.17■□□□□ 0.82
COL1A1-207ENST00000486572 A0A0U1RQF3 1178 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 EPOPA6NHQ4 379 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 LRRIQ4A6NIV6 560 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 ERLIN2O94905 339 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 F13A1P00488 732 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 NASPP49321 788 aaPredicted RBP20.17■□□□□ 0.82
COL1A1-207ENST00000486572 TWF2Q6IBS0 349 aaKnown RBP20.17■□□□□ 0.82
COL1A1-207ENST00000486572 ECHDC2Q86YB7 292 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 KIFAP3Q92845 792 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 ZNF396Q96N95 335 aaPredicted RBP20.17■□□□□ 0.82
COL1A1-207ENST00000486572 PLIN2Q99541 437 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 C17orf80Q9BSJ5 609 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 TRAIPQ9BWF2 469 aa20.17■□□□□ 0.82
COL1A1-207ENST00000486572 SRPRBQ9Y5M8 271 aaKnown RBP20.17■□□□□ 0.82
COL1A1-207ENST00000486572 INO80B-WBP1J3KQ70 363 aa20.16■□□□□ 0.82
COL1A1-207ENST00000486572 MBTD1Q05BQ5 628 aa20.16■□□□□ 0.82
COL1A1-207ENST00000486572 PKP1Q13835 747 aa20.16■□□□□ 0.82
COL1A1-207ENST00000486572 ADGRE1Q14246 886 aa20.16■□□□□ 0.82
COL1A1-207ENST00000486572 BECN1Q14457 450 aa20.16■□□□□ 0.82
COL1A1-207ENST00000486572 SLC39A14Q15043 492 aa20.16■□□□□ 0.82
COL1A1-207ENST00000486572 RASSF8Q8NHQ8 419 aa20.16■□□□□ 0.82
COL1A1-207ENST00000486572 CSRNP2Q9H175 543 aa20.16■□□□□ 0.82
COL1A1-207ENST00000486572 RFXAPO00287 272 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 HOXA2O43364 376 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 FGFR1P11362 822 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 NAMPTP43490 491 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 GATMP50440 423 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 RAB27AP51159 221 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms