RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 ATP2B1P20020 1258 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 APEX1P27695 318 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 SDHAP31040 664 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 PEX19P40855 299 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 CD83Q01151 205 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 POU5F1BQ06416 359 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 FOXL1Q12952 345 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 SAFB2Q14151 953 aaKnown RBP eCLIP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 FAM209AQ5JX71 171 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 KANK2Q63ZY3 851 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 LARP4Q71RC2 724 aaKnown RBP eCLIP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 GET4Q7L5D6 327 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 D2HGDHQ8N465 521 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 ZNF808Q8N4W9 903 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 SHCBP1Q8NEM2 672 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 CACTINQ8WUQ7 758 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 GFM2Q969S9 779 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 CHFRQ96EP1 664 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 MAGEB10Q96LZ2 347 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 CEP89Q96ST8 783 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 CELF4Q9BZC1 486 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 KIAA1683Q9H0B3 1180 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 SMURF1Q9HCE7 757 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 UCKL1Q9NWZ5 548 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 GABBR1Q9UBS5 961 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 TCEAL9Q9UHQ7 104 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 CDC42EP3Q9UKI2 254 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 MRPS23Q9Y3D9 190 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 TBX22Q9Y458 520 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 PCDHA9Q9Y5H5 950 aa5.11□□□□□ -1.59
R3HDM1-217ENST00000486532 SLC12A8A0AV02 714 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 CCDC189A1A4V9 331 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 CAPN14A8MX76 684 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 SCDO00767 359 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 FAM200BP0CF97 657 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 MC4RP32245 332 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 TBX4P57082 545 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 LMOD3Q0VAK6 560 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 NOLC1Q14978 699 aaKnown RBP eCLIP5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 CREBRFQ8IUR6 639 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 DRC7Q8IY82 874 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 IL17DQ8TAD2 202 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 ZNF483Q8TF39 744 aaPredicted RBP5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 CFHR4Q92496 578 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 RABGGTAQ92696 567 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 GBP4Q96PP9 640 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 AMNQ9BXJ7 453 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 INO80BQ9C086 356 aaPredicted RBP5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 PFDN2Q9UHV9 154 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 SYNPO2Q9UMS6 1093 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 COL4A3BPQ9Y5P4 624 aa5.1□□□□□ -1.59
R3HDM1-217ENST00000486532 KDM2BQ8NHM5 1336 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 PPFIA2O75334 1257 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 MMEP08473 750 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 CD53P19397 219 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 HSD3B2P26439 372 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 CRHR2Q13324 411 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 TBR1Q16650 682 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 PLEKHG6Q3KR16 790 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 CCDC144BQ3MJ40 725 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 CCSAPQ6IQ19 270 aaPredicted RBP5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 KLHDC10Q6PID8 442 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 NBPF5PQ86XG9 351 aaPredicted RBP5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 EGFL6Q8IUX8 553 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 C1orf131Q8NDD1 294 aaKnown RBP5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 ASB15Q8WXK1 588 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 PRRX2Q99811 253 aa5.09□□□□□ -1.59
R3HDM1-217ENST00000486532 A0A087X1B8 175 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 PRAMEF22A3QJZ6 481 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 CCDC85CA6NKD9 419 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 GOLGA6L22H0YM25 854 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 PLIN1O60240 522 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 MPIG6BO95866 241 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 C1SP09871 688 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 SCP2P22307 547 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 PSMC1P62191 440 aaKnown RBP5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 HGFACQ04756 655 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 MTA1Q13330 715 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 ARHGAP44Q17R89 818 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 RPAINQ86UA6 219 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 TMPRSS6Q8IU80 811 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 NOSTRINQ8IVI9 506 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 CISD2Q8N5K1 135 aaKnown RBP5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 OR14K1Q8NGZ2 314 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 NEU4Q8WWR8 484 aaPredicted RBP5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 EXOC2Q96KP1 924 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 SLC6A15Q9H2J7 730 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 IFT122Q9HBG6 1241 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 SAE1Q9UBE0 346 aaPredicted RBP5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 NDOR1Q9UHB4 597 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 NRBP1Q9UHY1 535 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 B3GALT1Q9Y5Z6 326 aa5.08□□□□□ -1.6
R3HDM1-217ENST00000486532 SETD1BQ9UPS6 1966 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-217ENST00000486532 A0A1W2PRX2 142 aa5.07□□□□□ -1.6
R3HDM1-217ENST00000486532 FAM153BP0C7A2 387 aa5.07□□□□□ -1.6
R3HDM1-217ENST00000486532 RIN1Q13671 783 aa5.07□□□□□ -1.6
R3HDM1-217ENST00000486532 MAPRE1Q15691 268 aaKnown RBP5.07□□□□□ -1.6
R3HDM1-217ENST00000486532 TRIM61Q5EBN2 209 aa5.07□□□□□ -1.6
R3HDM1-217ENST00000486532 EFCAB2Q5VUJ9 269 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms