RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 TISP43B9A030 160 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 CALUO43852 315 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-207ENST00000486080 DUSP11O75319 330 aaKnown RBP15.86■□□□□ 0.13
COL9A1-207ENST00000486080 C22orf31O95567 290 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 PRKAR2AP13861 404 aaKnown RBP15.86■□□□□ 0.13
COL9A1-207ENST00000486080 NR2F2P24468 414 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 ALCAMQ13740 583 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 FSCN1Q16658 493 aaKnown RBP15.86■□□□□ 0.13
COL9A1-207ENST00000486080 ZNF484Q5JVG2 852 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 ZC3H3Q8IXZ2 948 aaKnown RBP15.86■□□□□ 0.13
COL9A1-207ENST00000486080 SYCP3Q8IZU3 236 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 PRPF31Q8WWY3 499 aaKnown RBP15.86■□□□□ 0.13
COL9A1-207ENST00000486080 ERO1AQ96HE7 468 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 ACCSQ96QU6 501 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 HTTP42858 3142 aa15.86■□□□□ 0.13
COL9A1-207ENST00000486080 FGFR1OPO95684 399 aaKnown RBP15.85■□□□□ 0.13
COL9A1-207ENST00000486080 NR3C1P04150 777 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 MYL3P08590 195 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 CPT1AP50416 773 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 EFCAB12Q6NXP0 572 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 FAM114A1Q8IWE2 563 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 SLC17A8Q8NDX2 589 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 RAET1EQ8TD07 263 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 CTAGE1Q96RT6 745 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 GBP3Q9H0R5 595 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 RTN4Q9NQC3 1192 aaKnown RBP15.85■□□□□ 0.13
COL9A1-207ENST00000486080 AGPAT3Q9NRZ7 376 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 TBX20Q9UMR3 447 aa15.85■□□□□ 0.13
COL9A1-207ENST00000486080 N4BP3O15049 544 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 SEPT4O43236 478 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 F2P00734 622 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 GJB1P08034 283 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 C6orf222P0C671 652 aaPredicted RBP15.84■□□□□ 0.13
COL9A1-207ENST00000486080 KLRC1P26715 233 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 MTIF2P46199 727 aaKnown RBP15.84■□□□□ 0.13
COL9A1-207ENST00000486080 CLCN3P51790 818 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 PPFIA1Q13136 1202 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 CAPSQ13938 189 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 IER5Q5VY09 327 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 TAS1R3Q7RTX0 852 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 METTL13Q8N6R0 699 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 ANKRD20A12PQ8NF67 263 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 CEP63Q96MT8 703 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 TUBGCP2Q9BSJ2 902 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 ARHGAP28Q9P2N2 729 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 SIP14410 1827 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 LRRIQ4A6NIV6 560 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 CETN3O15182 167 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 PGK1P00558 417 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 GNRH1P01148 92 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 HMGCRP04035 888 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 PTMAP06454 111 aaKnown RBP15.84■□□□□ 0.13
COL9A1-207ENST00000486080 NAMPTP43490 491 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 LAMTOR4Q0VGL1 99 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 GRIK4Q16099 956 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 KIAA0753Q2KHM9 967 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 MARCH8Q5T0T0 291 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 TMC6Q7Z403 805 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 FILIP1Q7Z7B0 1213 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 EXOC8Q8IYI6 725 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 TCP11Q8WWU5 503 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 TMEM206Q9H813 350 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 SETD4Q9NVD3 440 aa15.84■□□□□ 0.13
COL9A1-207ENST00000486080 SUCLA2Q9P2R7 463 aaPredicted RBP15.84■□□□□ 0.13
COL9A1-207ENST00000486080 TRIP12Q14669 1992 aaPredicted RBP15.84■□□□□ 0.13
COL9A1-207ENST00000486080 COL1A2P08123 1366 aa15.83■□□□□ 0.13
COL9A1-207ENST00000486080 GAS2O43903 313 aaKnown RBP15.83■□□□□ 0.12
COL9A1-207ENST00000486080 PRKCSHP14314 528 aaPredicted RBP15.83■□□□□ 0.12
COL9A1-207ENST00000486080 CASP4P49662 377 aa15.83■□□□□ 0.12
COL9A1-207ENST00000486080 GJA9P57773 515 aa15.83■□□□□ 0.12
COL9A1-207ENST00000486080 MFSD10Q14728 455 aa15.83■□□□□ 0.12
COL9A1-207ENST00000486080 PPP2R5AQ15172 486 aa15.83■□□□□ 0.12
COL9A1-207ENST00000486080 FILIP1LQ4L180 1135 aa15.83■□□□□ 0.12
COL9A1-207ENST00000486080 BRDTQ58F21 947 aaPredicted RBP15.83■□□□□ 0.12
COL9A1-207ENST00000486080 MTHFD1LQ6UB35 978 aa15.83■□□□□ 0.12
COL9A1-207ENST00000486080 HS2ST1Q7LGA3 356 aa15.83■□□□□ 0.12
COL9A1-207ENST00000486080 MAP4K3Q8IVH8 894 aa15.83■□□□□ 0.12
COL9A1-207ENST00000486080 VSTM4Q8IW00 320 aa15.83■□□□□ 0.12
COL9A1-207ENST00000486080 PSPC1Q8WXF1 523 aaKnown RBP15.83■□□□□ 0.12
COL9A1-207ENST00000486080 ZNF668Q96K58 619 aaPredicted RBP15.83■□□□□ 0.12
COL9A1-207ENST00000486080 ANKRD63C9JTQ0 380 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 AKAP3O75969 853 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 TPM3P06753 285 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 SRGAP2CP0DJJ0 459 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 SMIM10L2AP0DMW4 78 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 SMIM10L2BP0DMW5 78 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 RARBP10826 455 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 PSEN2P49810 448 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 CYP2J2P51589 502 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 PURAQ00577 322 aaKnown RBP15.82■□□□□ 0.12
COL9A1-207ENST00000486080 CCDC40Q4G0X9 1142 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 GNASQ5JWF2 1037 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 MIIPQ5JXC2 388 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 MAP3K21Q5TCX8 1036 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 RHPN2Q8IUC4 686 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 LINC01465Q8N7H1 131 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 DEPTORQ8TB45 409 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 HVCN1Q96D96 273 aa15.82■□□□□ 0.12
COL9A1-207ENST00000486080 JPH2Q9BR39 696 aaPredicted RBP15.82■□□□□ 0.12
COL9A1-207ENST00000486080 UPF3AQ9H1J1 476 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms