RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 CDC42EP1Q00587 391 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 MGAT3Q09327 533 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 STK4Q13043 487 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 FAM47CQ5HY64 1035 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 MAEAQ7L5Y9 396 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 ZNF720Q7Z2F6 126 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 SFR1Q86XK3 245 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 METTL13Q8N6R0 699 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 TRIML1Q8N9V2 468 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 TMEM161BQ8NDZ6 487 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 DNAJB3Q8WWF6 145 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 FGFBP2Q9BYJ0 223 aa17.51■□□□□ 0.39
APOE-205ENST00000485628 LARSQ9P2J5 1176 aaKnown RBP17.51■□□□□ 0.39
APOE-205ENST00000485628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.5■□□□□ 0.39
APOE-205ENST00000485628 FAM13AO94988 1023 aa17.5■□□□□ 0.39
APOE-205ENST00000485628 IDEP14735 1019 aa17.5■□□□□ 0.39
APOE-205ENST00000485628 GPC3P51654 580 aa17.5■□□□□ 0.39
APOE-205ENST00000485628 PTENP60484 403 aa17.5■□□□□ 0.39
APOE-205ENST00000485628 FAAP100Q0VG06 881 aa17.5■□□□□ 0.39
APOE-205ENST00000485628 LRRC26Q2I0M4 334 aa17.5■□□□□ 0.39
APOE-205ENST00000485628 KSR1Q8IVT5 923 aa17.5■□□□□ 0.39
APOE-205ENST00000485628 KIAA0895Q8NCT3 520 aa17.5■□□□□ 0.39
APOE-205ENST00000485628 KCNG1Q9UIX4 513 aa17.5■□□□□ 0.39
APOE-205ENST00000485628 TBCAO75347 108 aaKnown RBP17.49■□□□□ 0.39
APOE-205ENST00000485628 LETM1O95202 739 aaPredicted RBP17.49■□□□□ 0.39
APOE-205ENST00000485628 VTNP04004 478 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 KRT18P05783 430 aaKnown RBP17.49■□□□□ 0.39
APOE-205ENST00000485628 SCP2P22307 547 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 HOXD13P35453 343 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 CASP5P51878 434 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 PEX3P56589 373 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 GTF2BQ00403 316 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 PPP2R5AQ15172 486 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 ZSCAN23Q3MJ62 389 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 TRIM60Q495X7 471 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 HERC4Q5GLZ8 1057 aaPredicted RBP17.49■□□□□ 0.39
APOE-205ENST00000485628 FAM26FQ5R3K3 315 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 ODR4Q5SWX8 454 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 ZNF658Q5TYW1 1059 aaPredicted RBP17.49■□□□□ 0.39
APOE-205ENST00000485628 TAS1R3Q7RTX0 852 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 ZNF410Q86VK4 478 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 MYCT1Q8N699 235 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 GLIS3Q8NEA6 775 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 HPS3Q969F9 1004 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 GTPBP4Q9BZE4 634 aaKnown RBP17.49■□□□□ 0.39
APOE-205ENST00000485628 CCDC113Q9H0I3 377 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 TMEM134Q9H6X4 195 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 CDHR5Q9HBB8 845 aa17.49■□□□□ 0.39
APOE-205ENST00000485628 CHRNA1P02708 482 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 ATN1P54259 1190 aaPredicted RBP17.48■□□□□ 0.39
APOE-205ENST00000485628 TLE2Q04725 743 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 BMT2Q1RMZ1 405 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 RHPN2Q8IUC4 686 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 SLC17A8Q8NDX2 589 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 ZNF507Q8TCN5 953 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 MAP7D2Q96T17 732 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 EXOC1Q9NV70 894 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 RMND1Q9NWS8 449 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 TBX21Q9UL17 535 aa17.48■□□□□ 0.39
APOE-205ENST00000485628 EIF3DO15371 548 aaKnown RBP eCLIP17.47■□□□□ 0.39
APOE-205ENST00000485628 IQCF3P0C7M6 154 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 CKBP12277 381 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 NMT1P30419 496 aaKnown RBP17.47■□□□□ 0.39
APOE-205ENST00000485628 CRYBB1P53674 252 aaPredicted RBP17.47■□□□□ 0.39
APOE-205ENST00000485628 NLRP11P59045 1033 aaKnown RBP17.47■□□□□ 0.39
APOE-205ENST00000485628 MRPS6P82932 125 aaKnown RBP17.47■□□□□ 0.39
APOE-205ENST00000485628 DMP1Q13316 513 aaPredicted RBP17.47■□□□□ 0.39
APOE-205ENST00000485628 FAM187BQ17R55 369 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 HAUS6Q7Z4H7 955 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 FAM178BQ8IXR5 827 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 RNF149Q8NC42 400 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 CAGE1Q8TC20 777 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 SCFD1Q8WVM8 642 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 IFT74Q96LB3 600 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 CELF4Q9BZC1 486 aaKnown RBP17.47■□□□□ 0.39
APOE-205ENST00000485628 FZD8Q9H461 694 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 MINDY3Q9H8M7 445 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 AKT3Q9Y243 479 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 GDAQ9Y2T3 454 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 SQORQ9Y6N5 450 aa17.47■□□□□ 0.39
APOE-205ENST00000485628 A0A087WZ62 844 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 PPP1R3GB7ZBB8 358 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 SLC16A4O15374 487 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 CD44P16070 742 aaKnown RBP17.46■□□□□ 0.39
APOE-205ENST00000485628 NLRP12P59046 1061 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 ALCAMQ13740 583 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 TFDP1Q14186 410 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 GPNMBQ14956 572 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 AMHR2Q16671 573 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 SRGAP1Q7Z6B7 1085 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 ADSSL1Q8N142 457 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 TMEM40Q8WWA1 233 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 FDXACB1Q9BRP7 624 aaPredicted RBP17.46■□□□□ 0.39
APOE-205ENST00000485628 FAM49AQ9H0Q0 323 aaPredicted RBP17.46■□□□□ 0.39
APOE-205ENST00000485628 SLC39A2Q9NP94 309 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 KMT5AQ9NQR1 393 aa17.46■□□□□ 0.39
APOE-205ENST00000485628 DCDC2CA8MYV0 355 aa17.45■□□□□ 0.38
APOE-205ENST00000485628 TLR3O15455 904 aaKnown RBP17.45■□□□□ 0.38
APOE-205ENST00000485628 PQBP1O60828 265 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms