RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 CTAGE1Q96RT6 745 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 PLIN2Q99541 437 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 MMTAG2Q9BU76 263 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 PBX4Q9BYU1 374 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 LARSQ9P2J5 1176 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 WRAP73Q9P2S5 460 aaPredicted RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 COL4A3BPQ9Y5P4 624 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 TMEM150BA6NC51 233 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 GRXCR1A8MXD5 290 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 E9PMD0 336 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 ZBTB39O15060 712 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 POLR2DO15514 142 aaKnown RBP9.15□□□□□ -0.94
SF3A1-208ENST00000485618 RPS6KA5O75582 802 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 CHRNA1P02708 482 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 CXCL10P02778 98 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 VTNP04004 478 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 MYL1P05976 194 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 ACRP10323 421 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 SKIP12755 728 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 ZSCAN20P17040 1043 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-208ENST00000485618 ARL2P36404 184 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 SYKP43405 635 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 KCNJ6P48051 423 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.94
SF3A1-208ENST00000485618 DMP1Q13316 513 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-208ENST00000485618 GRB10Q13322 594 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 HIC1Q14526 733 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 KIZQ2M2Z5 673 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 SPECC1Q5M775 1068 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 TMEM240Q5SV17 173 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 RESP18Q5W5W9 173 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 RINT1Q6NUQ1 792 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 STXBP4Q6ZWJ1 553 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 SRGAP1Q7Z6B7 1085 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 DEFB128Q7Z7B8 93 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 GPBP1Q86WP2 473 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 RNF149Q8NC42 400 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 MRPS27Q92552 414 aaKnown RBP9.15□□□□□ -0.94
SF3A1-208ENST00000485618 NLRP4Q96MN2 994 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 PNMA5Q96PV4 448 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 NFKBIZQ9BYH8 718 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 IFIH1Q9BYX4 1025 aaKnown RBP9.15□□□□□ -0.94
SF3A1-208ENST00000485618 PANK2Q9BZ23 570 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 POLR3FQ9H1D9 316 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-208ENST00000485618 TNMDQ9H2S6 317 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 PRDM12Q9H4Q4 367 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 DACT1Q9NYF0 836 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 ODF2LQ9ULJ1 636 aa9.15□□□□□ -0.94
SF3A1-208ENST00000485618 TRIP12Q14669 1992 aaPredicted RBP9.14□□□□□ -0.95
SF3A1-208ENST00000485618 LOXHD1Q8IVV2 1947 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 DENND3A2RUS2 1198 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 LRRIQ4A6NIV6 560 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 CCDC169A6NNP5 214 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 TNFRSF10AO00220 468 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 GPR32O75388 356 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 ERLIN2O94905 339 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 FAM13AO94988 1023 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 AMHP03971 560 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 SLFN14P0C7P3 912 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 DARSP14868 501 aaKnown RBP9.14□□□□□ -0.95
SF3A1-208ENST00000485618 GAP43P17677 238 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 AXLP30530 894 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 PLA2G5P39877 138 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 NAMPTP43490 491 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 GPC3P51654 580 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 SLC12A3P55017 1021 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 GRIN1Q05586 938 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 MGAT3Q09327 533 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 TMEM62Q0P6H9 643 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 STRN3Q13033 797 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 DHX8Q14562 1220 aaKnown RBP9.14□□□□□ -0.95
SF3A1-208ENST00000485618 RAB30Q15771 203 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 ECM1Q16610 540 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 MAPK6Q16659 721 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 TMEM132AQ24JP5 1023 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 PLEKHG4Q58EX7 1191 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 FBXO47Q5MNV8 452 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 AXDND1Q5T1B0 1012 aaPredicted RBP9.14□□□□□ -0.95
SF3A1-208ENST00000485618 SHC4Q6S5L8 630 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 C1orf186Q6ZWK4 172 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 ZNF365Q70YC5 407 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 C16orf59Q7L2K0 433 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 MAEAQ7L5Y9 396 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 CCDC65Q8IXS2 484 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 LINC01465Q8N7H1 131 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 PDILTQ8N807 584 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 PHOSPHO2Q8TCD6 241 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 DHX58Q96C10 678 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 SCLYQ96I15 445 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 CEP89Q96ST8 783 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 SH2D3AQ9BRG2 576 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 WNT8AQ9H1J5 351 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 ZHX3Q9H4I2 956 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 PARVGQ9HBI0 331 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 CHST12Q9NRB3 414 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 C1orf112Q9NSG2 853 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 THEGQ9P2T0 379 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 SLC4A7Q9Y6M7 1214 aa9.14□□□□□ -0.95
SF3A1-208ENST00000485618 WDR81Q562E7 1941 aa9.13□□□□□ -0.95
SF3A1-208ENST00000485618 PRUNE2Q8WUY3 3088 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms