RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ERVFC1P60507 584 aa28.82■■■□□ 2.2
HLA-F-227ENST00000485513 ZNF410Q86VK4 478 aa28.82■■■□□ 2.2
HLA-F-227ENST00000485513 RHPN2Q8IUC4 686 aa28.82■■■□□ 2.2
HLA-F-227ENST00000485513 POP1Q99575 1024 aaKnown RBP28.82■■■□□ 2.2
HLA-F-227ENST00000485513 FDXACB1Q9BRP7 624 aaPredicted RBP28.82■■■□□ 2.2
HLA-F-227ENST00000485513 CHST12Q9NRB3 414 aa28.82■■■□□ 2.2
HLA-F-227ENST00000485513 LZTS1Q9Y250 596 aa28.82■■■□□ 2.2
HLA-F-227ENST00000485513 TBX3O15119 743 aa28.81■■■□□ 2.2
HLA-F-227ENST00000485513 MARCH6O60337 910 aa28.81■■■□□ 2.2
HLA-F-227ENST00000485513 EYA4O95677 639 aa28.81■■■□□ 2.2
HLA-F-227ENST00000485513 GLP2RO95838 553 aa28.81■■■□□ 2.2
HLA-F-227ENST00000485513 SFPQP23246 707 aaKnown RBP eCLIP28.81■■■□□ 2.2
HLA-F-227ENST00000485513 PLCB3Q01970 1234 aa28.81■■■□□ 2.2
HLA-F-227ENST00000485513 CLLU1OSQ5K130 101 aa28.81■■■□□ 2.2
HLA-F-227ENST00000485513 KCNT2Q6UVM3 1135 aa28.81■■■□□ 2.2
HLA-F-227ENST00000485513 ZNF598Q86UK7 904 aaKnown RBP28.81■■■□□ 2.2
HLA-F-227ENST00000485513 MRPS27Q92552 414 aaKnown RBP28.81■■■□□ 2.2
HLA-F-227ENST00000485513 ZNF558Q96NG5 402 aa28.81■■■□□ 2.2
HLA-F-227ENST00000485513 INO80BQ9C086 356 aaPredicted RBP28.81■■■□□ 2.2
HLA-F-227ENST00000485513 CYP26B1Q9NR63 512 aa28.81■■■□□ 2.2
HLA-F-227ENST00000485513 PUF60Q9UHX1 559 aaKnown RBP28.81■■■□□ 2.2
HLA-F-227ENST00000485513 FSCN2O14926 492 aa28.8■■■□□ 2.2
HLA-F-227ENST00000485513 PER2O15055 1255 aa28.8■■■□□ 2.2
HLA-F-227ENST00000485513 DCXO43602 365 aa28.8■■■□□ 2.2
HLA-F-227ENST00000485513 P4HBP07237 508 aaKnown RBP28.8■■■□□ 2.2
HLA-F-227ENST00000485513 PPM1AP35813 382 aa28.8■■■□□ 2.2
HLA-F-227ENST00000485513 COASYQ13057 564 aa28.8■■■□□ 2.2
HLA-F-227ENST00000485513 NECAB1Q8N987 351 aa28.8■■■□□ 2.2
HLA-F-227ENST00000485513 SMRP1Q8NCR6 262 aa28.8■■■□□ 2.2
HLA-F-227ENST00000485513 HAS1Q92839 578 aa28.8■■■□□ 2.2
HLA-F-227ENST00000485513 CDCA3Q99618 268 aaPredicted RBP28.8■■■□□ 2.2
HLA-F-227ENST00000485513 BARX2Q9UMQ3 279 aaPredicted RBP28.8■■■□□ 2.2
HLA-F-227ENST00000485513 FSD2A1L4K1 749 aa28.79■■■□□ 2.2
HLA-F-227ENST00000485513 ATF7P17544 494 aaPredicted RBP28.79■■■□□ 2.2
HLA-F-227ENST00000485513 NPEPPSP55786 919 aa28.79■■■□□ 2.2
HLA-F-227ENST00000485513 EARS2Q5JPH6 523 aaKnown RBP28.79■■■□□ 2.2
HLA-F-227ENST00000485513 ERICH6BQ5W0A0 696 aa28.79■■■□□ 2.2
HLA-F-227ENST00000485513 HELQQ8TDG4 1101 aa28.79■■■□□ 2.2
HLA-F-227ENST00000485513 NLRP4Q96MN2 994 aa28.79■■■□□ 2.2
HLA-F-227ENST00000485513 HCN4Q9Y3Q4 1203 aa28.79■■■□□ 2.2
HLA-F-227ENST00000485513 FDPSP14324 419 aaKnown RBP28.78■■■□□ 2.2
HLA-F-227ENST00000485513 KRT2P35908 639 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 PBX3P40426 434 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 EPHA7Q15375 998 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 ME3Q16798 604 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 DUSP6Q16828 381 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 PLPP4Q5VZY2 271 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 POTEDQ86YR6 584 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 KSR1Q8IVT5 923 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 SLC7A3Q8WY07 619 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 CEP170P1Q96L14 293 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 BRMS1Q9HCU9 246 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 SPG21Q9NZD8 308 aa28.78■■■□□ 2.2
HLA-F-227ENST00000485513 WRAP73Q9P2S5 460 aaPredicted RBP28.78■■■□□ 2.2
HLA-F-227ENST00000485513 FAM205CA6NFA0 338 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 PHKA2P46019 1235 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 KRT17Q04695 432 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 NR5A1Q13285 461 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 TWF2Q6IBS0 349 aaKnown RBP28.77■■■□□ 2.2
HLA-F-227ENST00000485513 EXOC8Q8IYI6 725 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 GTF3C6Q969F1 213 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 TCF25Q9BQ70 676 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 TRAIPQ9BWF2 469 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 MRPL9Q9BYD2 267 aaKnown RBP28.77■■■□□ 2.2
HLA-F-227ENST00000485513 ENTPD7Q9NQZ7 604 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 PIN4Q9Y237 131 aaKnown RBP28.77■■■□□ 2.2
HLA-F-227ENST00000485513 PPME1Q9Y570 386 aa28.77■■■□□ 2.2
HLA-F-227ENST00000485513 PRR33A8MZF0 331 aa28.76■■■□□ 2.19
HLA-F-227ENST00000485513 BAG4O95429 457 aaKnown RBP28.76■■■□□ 2.19
HLA-F-227ENST00000485513 LARGE1O95461 756 aa28.76■■■□□ 2.19
HLA-F-227ENST00000485513 POLGP54098 1239 aaPredicted RBP28.76■■■□□ 2.19
HLA-F-227ENST00000485513 NCAPH2Q6IBW4 605 aa28.76■■■□□ 2.19
HLA-F-227ENST00000485513 CATSPER4Q7RTX7 472 aa28.76■■■□□ 2.19
HLA-F-227ENST00000485513 C4orf19Q8IY42 314 aa28.76■■■□□ 2.19
HLA-F-227ENST00000485513 SLFN12Q8IYM2 578 aa28.76■■■□□ 2.19
HLA-F-227ENST00000485513 ZNF579Q8NAF0 562 aaKnown RBP28.76■■■□□ 2.19
HLA-F-227ENST00000485513 LXNQ9BS40 222 aa28.76■■■□□ 2.19
HLA-F-227ENST00000485513 NGRNQ9NPE2 291 aaKnown RBP28.76■■■□□ 2.19
HLA-F-227ENST00000485513 COL4A3BPQ9Y5P4 624 aa28.76■■■□□ 2.19
HLA-F-227ENST00000485513 SKIP12755 728 aa28.75■■■□□ 2.19
HLA-F-227ENST00000485513 RBM10P98175 930 aaKnown RBP28.75■■■□□ 2.19
HLA-F-227ENST00000485513 VN1R2Q8NFZ6 395 aa28.75■■■□□ 2.19
HLA-F-227ENST00000485513 TNFRSF25Q93038 417 aa28.75■■■□□ 2.19
HLA-F-227ENST00000485513 DHX33Q9H6R0 707 aaKnown RBP28.75■■■□□ 2.19
HLA-F-227ENST00000485513 RGL1Q9NZL6 768 aa28.75■■■□□ 2.19
HLA-F-227ENST00000485513 PLA2G5P39877 138 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 RFC5P40937 340 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 SPIRE1Q08AE8 756 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 OTUD6AQ7L8S5 288 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 TMC7Q7Z402 723 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 SLC39A11Q8N1S5 342 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 NSUN7Q8NE18 718 aaKnown RBP28.74■■■□□ 2.19
HLA-F-227ENST00000485513 RSPH1Q8WYR4 309 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 FAM122AQ96E09 287 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 DYDC2Q96IM9 177 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 IFT122Q9HBG6 1241 aa28.74■■■□□ 2.19
HLA-F-227ENST00000485513 USP15Q9Y4E8 981 aaPredicted RBP28.74■■■□□ 2.19
HLA-F-227ENST00000485513 EIF5BO60841 1220 aaKnown RBP28.73■■■□□ 2.19
HLA-F-227ENST00000485513 YWHABP31946 246 aaKnown RBP28.73■■■□□ 2.19
HLA-F-227ENST00000485513 NEK4P51957 841 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms