RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PTENP60484 403 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 CAPSQ13938 189 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 ZNF697Q5TEC3 545 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 NPAS4Q8IUM7 802 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 KRI1Q8N9T8 703 aaKnown RBP17.64■□□□□ 0.41
UPF3A-208ENST00000484246 RNF149Q8NC42 400 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 TRAIPQ9BWF2 469 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 CSRNP2Q9H175 543 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 CHST12Q9NRB3 414 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 KCND2Q9NZV8 630 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 ZDHHC9Q9Y397 364 aa17.64■□□□□ 0.41
UPF3A-208ENST00000484246 C9IYK1 514 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 E9PMD0 336 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 RBAK-RBAKDNI3L0D1 243 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 TLL1O43897 1013 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 GUCY2CP25092 1073 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 MARCKSP29966 332 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-208ENST00000484246 DDIT3P35638 169 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 SARSP49591 514 aaKnown RBP17.63■□□□□ 0.41
UPF3A-208ENST00000484246 FAM189BP81408 668 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 STK38Q15208 465 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 CDCA2Q69YH5 1023 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-208ENST00000484246 SLC24A5Q71RS6 500 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 SYT2Q8N9I0 419 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-208ENST00000484246 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 CALML4Q96GE6 196 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 CDK5RAP3Q96JB5 506 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 ZNF668Q96K58 619 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-208ENST00000484246 TTYH1Q9H313 450 aaPredicted RBP17.63■□□□□ 0.41
UPF3A-208ENST00000484246 ELAC1Q9H777 363 aaKnown RBP17.63■□□□□ 0.41
UPF3A-208ENST00000484246 INSL6Q9Y581 213 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 MICAL3Q7RTP6 2002 aa17.63■□□□□ 0.41
UPF3A-208ENST00000484246 SPTLC2O15270 562 aa17.62■□□□□ 0.41
UPF3A-208ENST00000484246 SLC12A3P55017 1021 aa17.62■□□□□ 0.41
UPF3A-208ENST00000484246 CEBPZQ03701 1054 aaKnown RBP17.62■□□□□ 0.41
UPF3A-208ENST00000484246 C1orf186Q6ZWK4 172 aa17.62■□□□□ 0.41
UPF3A-208ENST00000484246 KCNG4Q8TDN1 519 aa17.62■□□□□ 0.41
UPF3A-208ENST00000484246 ADAM2Q99965 735 aa17.62■□□□□ 0.41
UPF3A-208ENST00000484246 NKX2-4Q9H2Z4 354 aa17.62■□□□□ 0.41
UPF3A-208ENST00000484246 ZNF576Q9H609 170 aa17.62■□□□□ 0.41
UPF3A-208ENST00000484246 GPRC5CQ9NQ84 441 aa17.62■□□□□ 0.41
UPF3A-208ENST00000484246 AGPAT5Q9NUQ2 364 aa17.62■□□□□ 0.41
UPF3A-208ENST00000484246 DENND3A2RUS2 1198 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 SPDYE4A6NLX3 237 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 CA3P07451 260 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 STAG3L1P0CL83 205 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 SRGAP2CP0DJJ0 459 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 PLCG1P19174 1290 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 NAMPTP43490 491 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 PPP2R5AQ15172 486 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 FOXD4L5Q5VV16 416 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-208ENST00000484246 RINT1Q6NUQ1 792 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 TMCO2Q7Z6W1 182 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-208ENST00000484246 LRRC15Q8TF66 581 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 FOXD4L4Q8WXT5 416 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-208ENST00000484246 SYMPKQ92797 1274 aaKnown RBP17.61■□□□□ 0.41
UPF3A-208ENST00000484246 CLIC6Q96NY7 704 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 ZBED2Q9BTP6 218 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 RUSC1Q9BVN2 902 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 SEMA6BQ9H3T3 888 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 MINDY3Q9H8M7 445 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 C17orf75Q9HAS0 396 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 SLC28A3Q9HAS3 691 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 BLOC1S4Q9NUP1 217 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 MTMR10Q9NXD2 777 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 DACT1Q9NYF0 836 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 STK17AQ9UEE5 414 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 DAXXQ9UER7 740 aaPredicted RBP17.61■□□□□ 0.41
UPF3A-208ENST00000484246 CFAP45Q9UL16 551 aa17.61■□□□□ 0.41
UPF3A-208ENST00000484246 DGKIO75912 1065 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 PLA2G4BP0C869 781 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 MYOGP15173 224 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 ZSCAN20P17040 1043 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-208ENST00000484246 TXLNAP40222 546 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 TAP1Q03518 808 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 MBTD1Q05BQ5 628 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 MAPK7Q13164 816 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 KARSQ15046 597 aaKnown RBP17.6■□□□□ 0.41
UPF3A-208ENST00000484246 FAM102BQ5T8I3 360 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 PPP2R2DQ66LE6 453 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 USP49Q70CQ1 688 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 CATSPER4Q7RTX7 472 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 DAW1Q8N136 415 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 DEFB123Q8N688 67 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 RSPH1Q8WYR4 309 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 BSNDQ8WZ55 320 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 KCNN1Q92952 543 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 ZNF689Q96CS4 500 aaPredicted RBP17.6■□□□□ 0.41
UPF3A-208ENST00000484246 CCDC51Q96ER9 411 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 EPSTI1Q96J88 318 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 DRC1Q96MC2 740 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 C2orf40Q9H1Z8 148 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 TMEM161AQ9NX61 479 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 TFIP11Q9UBB9 837 aaKnown RBP17.6■□□□□ 0.41
UPF3A-208ENST00000484246 ATP6V1DQ9Y5K8 247 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 PTPRSQ13332 1948 aa17.6■□□□□ 0.41
UPF3A-208ENST00000484246 ADGRA3Q8IWK6 1321 aa17.59■□□□□ 0.41
UPF3A-208ENST00000484246 A0A0U1RQF3 1178 aa17.59■□□□□ 0.41
UPF3A-208ENST00000484246 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
UPF3A-208ENST00000484246 DLL1O00548 723 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms