RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 RHPN2Q8IUC4 686 aa18.71■□□□□ 0.59
PCGF3-211ENST00000484141 SPPL3Q8TCT6 385 aa18.71■□□□□ 0.59
PCGF3-211ENST00000484141 LXNQ9BS40 222 aa18.71■□□□□ 0.59
PCGF3-211ENST00000484141 C11orf84Q9BUA3 381 aaPredicted RBP18.71■□□□□ 0.59
PCGF3-211ENST00000484141 TMEM60Q9H2L4 133 aa18.71■□□□□ 0.59
PCGF3-211ENST00000484141 CYP26B1Q9NR63 512 aa18.71■□□□□ 0.59
PCGF3-211ENST00000484141 C1orf112Q9NSG2 853 aa18.71■□□□□ 0.59
PCGF3-211ENST00000484141 TYW1Q9NV66 732 aaKnown RBP18.71■□□□□ 0.59
PCGF3-211ENST00000484141 SUCLA2Q9P2R7 463 aaPredicted RBP18.71■□□□□ 0.59
PCGF3-211ENST00000484141 TBX3O15119 743 aa18.7■□□□□ 0.58
PCGF3-211ENST00000484141 LINC01565O15544 149 aa18.7■□□□□ 0.58
PCGF3-211ENST00000484141 P4HBP07237 508 aaKnown RBP18.7■□□□□ 0.58
PCGF3-211ENST00000484141 LTBRP36941 435 aa18.7■□□□□ 0.58
PCGF3-211ENST00000484141 DLX2Q07687 328 aaPredicted RBP18.7■□□□□ 0.58
PCGF3-211ENST00000484141 HYAL1Q12794 435 aa18.7■□□□□ 0.58
PCGF3-211ENST00000484141 LONRF3Q496Y0 759 aa18.7■□□□□ 0.58
PCGF3-211ENST00000484141 RNF169Q8NCN4 708 aa18.7■□□□□ 0.58
PCGF3-211ENST00000484141 TMEM143Q96AN5 459 aa18.7■□□□□ 0.58
PCGF3-211ENST00000484141 CEP170P1Q96L14 293 aa18.7■□□□□ 0.58
PCGF3-211ENST00000484141 CWH43Q9H720 699 aa18.7■□□□□ 0.58
PCGF3-211ENST00000484141 SLITRK3O94933 977 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 ATF7P17544 494 aaPredicted RBP18.69■□□□□ 0.58
PCGF3-211ENST00000484141 PBX3P40426 434 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 HERC4Q5GLZ8 1057 aaPredicted RBP18.69■□□□□ 0.58
PCGF3-211ENST00000484141 ODR4Q5SWX8 454 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 ECHDC2Q86YB7 292 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 RNF135Q8IUD6 432 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 POF1BQ8WVV4 589 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 NLRP4Q96MN2 994 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 CASD1Q96PB1 797 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 PHOX2BQ99453 314 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 IGFLR1Q9H665 355 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 ATP6V0A4Q9HBG4 840 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 BRMS1Q9HCU9 246 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 TMEM161AQ9NX61 479 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 RWDD3Q9Y3V2 267 aa18.69■□□□□ 0.58
PCGF3-211ENST00000484141 MBTPS2O43462 519 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 TXKP42681 527 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 TRIM29Q14134 588 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 CALCRLQ16602 461 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 CTC1Q2NKJ3 1217 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 CLLU1OSQ5K130 101 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 SPOUT1Q5T280 376 aaKnown RBP18.68■□□□□ 0.58
PCGF3-211ENST00000484141 TPH2Q8IWU9 490 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 MTMR9Q96QG7 549 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 EIF2AK1Q9BQI3 630 aaKnown RBP18.68■□□□□ 0.58
PCGF3-211ENST00000484141 PLVAPQ9BX97 442 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 MINDY3Q9H8M7 445 aa18.68■□□□□ 0.58
PCGF3-211ENST00000484141 POTEMA6NI47 508 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 MEIS3P2A8K0S8 358 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 BAG4O95429 457 aaKnown RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 ZSCAN20P17040 1043 aaPredicted RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 YWHABP31946 246 aaKnown RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 MCM7P33993 719 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 SMAD4Q13485 552 aaKnown RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 XKR9Q5GH70 373 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 ZNF598Q86UK7 904 aaKnown RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 C4orf19Q8IY42 314 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 COLGALT1Q8NBJ5 622 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 PRSS33Q8NF86 280 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 PRPF31Q8WWY3 499 aaKnown RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 LPPQ93052 612 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 P2RX5Q93086 422 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 NAP1L4Q99733 375 aaKnown RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 GCOM2Q9BZD3 368 aaPredicted RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 LMAN2LQ9H0V9 348 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 DHX33Q9H6R0 707 aaKnown RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 ELAC1Q9H777 363 aaKnown RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 TTC12Q9H892 705 aaPredicted RBP18.67■□□□□ 0.58
PCGF3-211ENST00000484141 IFT122Q9HBG6 1241 aa18.67■□□□□ 0.58
PCGF3-211ENST00000484141 NEMFO60524 1076 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 SRGAP2CP0DJJ0 459 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 DNM2P50570 870 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 PTPN5P54829 565 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 RBM10P98175 930 aaKnown RBP18.66■□□□□ 0.58
PCGF3-211ENST00000484141 NBR1Q14596 966 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 ZNF174Q15697 407 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 SLFN12Q8IYM2 578 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 HELQQ8TDG4 1101 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 C8orf76Q96K31 380 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 XPNPEP1Q9NQW7 623 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 PCDHA12Q9UN75 941 aa18.66■□□□□ 0.58
PCGF3-211ENST00000484141 ZNF318Q5VUA4 2279 aa18.65■□□□□ 0.58
PCGF3-211ENST00000484141 EIF5BO60841 1220 aaKnown RBP18.65■□□□□ 0.58
PCGF3-211ENST00000484141 TBX10O75333 385 aa18.65■□□□□ 0.58
PCGF3-211ENST00000484141 CD2BP2O95400 341 aaKnown RBP18.65■□□□□ 0.58
PCGF3-211ENST00000484141 POLGP54098 1239 aaPredicted RBP18.65■□□□□ 0.58
PCGF3-211ENST00000484141 ERVFC1P60507 584 aa18.65■□□□□ 0.58
PCGF3-211ENST00000484141 RBM23Q86U06 439 aaKnown RBP18.65■□□□□ 0.58
PCGF3-211ENST00000484141 EDAQ92838 391 aa18.65■□□□□ 0.58
PCGF3-211ENST00000484141 HSD17B14Q9BPX1 270 aa18.65■□□□□ 0.58
PCGF3-211ENST00000484141 TMEM117Q9H0C3 514 aa18.65■□□□□ 0.58
PCGF3-211ENST00000484141 ZSWIM4Q9H7M6 989 aa18.65■□□□□ 0.58
PCGF3-211ENST00000484141 CD207Q9UJ71 328 aa18.65■□□□□ 0.58
PCGF3-211ENST00000484141 COL4A3BPQ9Y5P4 624 aa18.65■□□□□ 0.58
PCGF3-211ENST00000484141 A0A0U1RQF3 1178 aa18.64■□□□□ 0.57
PCGF3-211ENST00000484141 PER2O15055 1255 aa18.64■□□□□ 0.57
PCGF3-211ENST00000484141 FGF18O76093 207 aa18.64■□□□□ 0.57
PCGF3-211ENST00000484141 RBM25P49756 843 aaKnown RBP18.64■□□□□ 0.57
PCGF3-211ENST00000484141 LAMTOR4Q0VGL1 99 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms