RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SUPT20HL2P0C7V6 817 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 ATP4AP20648 1035 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 DNAJB2P25686 324 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 ERCC5P28715 1186 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-216ENST00000484087 CDC25BP30305 580 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 HOXC8P31273 242 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 TECP42680 631 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 TXKP42681 527 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 SARSP49591 514 aaKnown RBP7.7□□□□□ -1.18
BRCA1-216ENST00000484087 PTPN11Q06124 597 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-216ENST00000484087 PPFIA1Q13136 1202 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 MORC3Q14149 939 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 PDIA5Q14554 519 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 PLCB4Q15147 1175 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 GRIK4Q16099 956 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 IL17AQ16552 155 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 MARCH8Q5T0T0 291 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 KRT79Q5XKE5 535 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 FAM117BQ6P1L5 589 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 PSRC1Q6PGN9 363 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-216ENST00000484087 MOXD1Q6UVY6 613 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 SERINC5Q86VE9 423 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 MRFAP1L1Q96HT8 127 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 CDHR1Q96JP9 859 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF668Q96K58 619 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-216ENST00000484087 GUCD1Q96NT3 240 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 IRX2Q9BZI1 471 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-216ENST00000484087 LRRC27Q9C0I9 530 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 UNC45AQ9H3U1 944 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 DDX25Q9UHL0 483 aaKnown RBP7.7□□□□□ -1.18
BRCA1-216ENST00000484087 ZKSCAN5Q9Y2L8 839 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 TRANK1O15050 2925 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 NFASCO94856 1347 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 KIAA1671Q9BY89 1806 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 A0A087WWV3 80 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 NRDCO43847 1150 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 LGR5O75473 907 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 INSRRP14616 1297 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 SELPP16109 830 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 CDK11BP21127 795 aaKnown RBP7.69□□□□□ -1.18
BRCA1-216ENST00000484087 IBSPP21815 317 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-216ENST00000484087 ADAM17P78536 824 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 PTK7Q13308 1070 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 STIM1Q13586 685 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 KARSQ15046 597 aaKnown RBP7.69□□□□□ -1.18
BRCA1-216ENST00000484087 RASIP1Q5U651 963 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 SWSAP1Q6NVH7 229 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 ABHD15Q6UXT9 468 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 SLFN12Q8IYM2 578 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 SPC24Q8NBT2 197 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 RETREG2Q8NC44 543 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 SPATA20Q8TB22 786 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 ENOX1Q8TC92 643 aaKnown RBP7.69□□□□□ -1.18
BRCA1-216ENST00000484087 DNAJB3Q8WWF6 145 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 MYLIPQ8WY64 445 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 NKX2-4Q9H2Z4 354 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 CERS4Q9HA82 394 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 GABBR1Q9UBS5 961 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 LRWD1Q9UFC0 647 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF215Q9UL58 517 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-216ENST00000484087 SAMM50Q9Y512 469 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 ATG2AQ2TAZ0 1938 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 NLRC5Q86WI3 1866 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 MYO9BQ13459 2157 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 KDM3AQ9Y4C1 1321 aa7.69□□□□□ -1.18
BRCA1-216ENST00000484087 A0A087X0B3 334 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 LCHNA4D1U4 455 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 GPR37O15354 613 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 SLC26A4O43511 780 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF862O60290 1169 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 SERPINC1P01008 464 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 GHRP10912 638 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 CIITAP33076 1130 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 PPP1R2P41236 205 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 STAT5BP51692 787 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 SETQ01105 290 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-216ENST00000484087 DPYDQ12882 1025 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 BFSP2Q13515 415 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 TPD52L1Q16890 204 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 LRCH2Q5VUJ6 765 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 PDXDC2PQ6P474 469 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.68□□□□□ -1.18
BRCA1-216ENST00000484087 GRAMD1CQ8IYS0 662 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 IGSF22Q8N9C0 903 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 GIMAP8Q8ND71 665 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-216ENST00000484087 BANK1Q8NDB2 785 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ERMNQ8TAM6 284 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ETNPPLQ8TBG4 499 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 CAGE1Q8TC20 777 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 AFAP1L1Q8TED9 768 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 HERVK_113Q902F9 699 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 MTMR9Q96QG7 549 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 FAM117AQ9C073 453 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 SMARCAD1Q9H4L7 1026 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 AZI2Q9H6S1 392 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 TTC12Q9H892 705 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF302Q9NR11 478 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 MTMR10Q9NXD2 777 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ERAP1Q9NZ08 941 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms