RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 YWHAEP62258 255 aaKnown RBP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 SP4Q02446 784 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 ITKQ08881 620 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 SEPT1Q8WYJ6 367 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 STK4Q13043 487 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 ANGPTL8Q6UXH0 198 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 MICU2Q8IYU8 434 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 SLC10A4Q96EP9 437 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 A6NJR5 290 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 TNNI3KQ59H18 835 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 AHI1Q8N157 1196 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 APPBP2Q92624 585 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 CMTM5Q96DZ9 223 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 SNF8Q96H20 258 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 ATP6V1HQ9UI12 483 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 MTO1Q9Y2Z2 717 aaKnown RBP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 FPGT-TNNI3KV9GXZ4 949 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 GOLGA8JA6NMD2 632 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 KRT38O76015 456 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 IYDQ6PHW0 289 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 FOXR1Q6PIV2 292 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 XAGE3Q8WTP9 111 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
COL12A1-207ENST00000483888 CCDC28BQ9BUN5 200 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 OSBPL8Q9BZF1 889 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 COL4A3BPQ9Y5P4 624 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
COL12A1-207ENST00000483888 STX7O15400 261 aaKnown RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 ENO3P13929 434 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 CCDC81Q6ZN84 652 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 SLITRK6Q9H5Y7 841 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 SNPHO15079 494 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 PSMC6P62333 389 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 MTF1Q14872 753 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 PDZD4Q76G19 769 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 SKA2Q8WVK7 121 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 TRABDQ9H4I3 376 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 STK39Q9UEW8 545 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 BTBD18B2RXH4 712 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 BFSP2Q13515 415 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 ANO4Q32M45 955 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 SNX30Q5VWJ9 437 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 MDM1Q8TC05 714 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 ASPSCR1Q9BZE9 553 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 DDX56Q9NY93 547 aaKnown RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 TRIM24O15164 1050 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 ATP5JP18859 108 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 CIITAP33076 1130 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 OR2W6PQ8NHA6 318 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 SCG3Q8WXD2 468 aaKnown RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 TMOD3Q9NYL9 352 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 CORO1CQ9ULV4 474 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 SRGAP2BP0DMP2 458 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 WLSQ5T9L3 541 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 KRT39Q6A163 491 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 CDAN1Q8IWY9 1227 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 MYH8P13535 1937 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 FAM47DPA6NHR8 397 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 FAM25AB3EWG3 89 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 FAM25CB3EWG5 89 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 FAM25GB3EWG6 89 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 ANGPT1Q15389 498 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 TAF1BQ53T94 588 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 NEUROG2Q9H2A3 272 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 OLA1Q9NTK5 396 aaKnown RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 SENP1Q9P0U3 644 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 WDR64B1ANS9 1081 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 TJP3O95049 919 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 POTEIP0CG38 1075 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 TAC1P20366 129 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 NR2F2P24468 414 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 ADCY7P51828 1080 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 HIF1AQ16665 826 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 TAGAPQ8N103 731 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 REXO1Q8N1G1 1221 aaKnown RBP10.88□□□□□ -0.67
COL12A1-207ENST00000483888 MMS19Q96T76 1030 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 TEX12Q9BXU0 123 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 H3BQF6 201 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 LONRF1Q17RB8 773 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 CLEC17AQ6ZS10 378 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 HACD3Q9P035 362 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 ADAMTS1Q9UHI8 967 aa10.88□□□□□ -0.67
COL12A1-207ENST00000483888 IDH3BO43837 385 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 FSBPO95073 299 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 RECQLP46063 649 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 CBX3Q13185 183 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 KBTBD3Q8NAB2 608 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 ZBTB18Q99592 522 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 SNX12Q9UMY4 172 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 SMG5Q9UPR3 1016 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 NDUFB9Q9Y6M9 179 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 BTN3A3O00478 584 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 LRPAP1P30533 357 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 MAPRE2Q15555 327 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 LRRC74BQ6ZQY2 392 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 SH3BP5LQ7L8J4 393 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 SMCR8Q8TEV9 937 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 LPIN2Q92539 896 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 IRX2Q9BZI1 471 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms