RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 NSMFQ6X4W1 530 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 STXBP4Q6ZWJ1 553 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 C16orf59Q7L2K0 433 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 EPM2AIP1Q7L775 607 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 DYMQ7RTS9 669 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 PPFIBP1Q86W92 1011 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 TPH2Q8IWU9 490 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 ZC3H3Q8IXZ2 948 aaKnown RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 C4orf19Q8IY42 314 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 SMAP1Q8IYB5 467 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 ZNF507Q8TCN5 953 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 NKD2Q969F2 451 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 MPHOSPH6Q99547 160 aaKnown RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 EDEM3Q9BZQ6 932 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 BHMT2Q9H2M3 363 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 UNC45AQ9H3U1 944 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 UBE2ZQ9H832 354 aaPredicted RBP5.98□□□□□ -1.45
COL17A1-206ENST00000483876 SLC39A2Q9NP94 309 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 ANKEF1Q9NU02 776 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 INTS13Q9NVM9 706 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 RGL1Q9NZL6 768 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 AGTPBP1Q9UPW5 1226 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 MAPK8IP1Q9UQF2 711 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 PCDHA10Q9Y5I2 948 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 PLXNA1Q9UIW2 1896 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 GPR179Q6PRD1 2367 aa5.98□□□□□ -1.45
COL17A1-206ENST00000483876 GRXCR2A6NFK2 248 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 TMEM221A6NGB7 291 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 SOBPA7XYQ1 873 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 LGALS16A8MUM7 142 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 WDR64B1ANS9 1081 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 AKR1B15C9JRZ8 316 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 M0R296 226 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 KIF2AO00139 706 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 EIF3DO15371 548 aaKnown RBP eCLIP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ARHGAP6O43182 974 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 TEX33O43247 280 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ATG7O95352 703 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ZIC2O95409 532 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 SSBP05455 408 aaKnown RBP eCLIP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 KRT18P05783 430 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 TPM1P09493 284 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 TAL1P17542 331 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 KCNA5P22460 613 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 FECHP22830 423 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 RPL13P26373 211 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ADCYAP1R1P41586 468 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 RABGGTBP53611 331 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 MCCD1P59942 119 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 PSMC5P62195 406 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 SNRPFP62306 86 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 IRX3P78415 501 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 PPP2R3AQ06190 1150 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 LRMPQ12912 555 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ITGB3BPQ13352 177 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 PPIGQ13427 754 aaKnown RBP eCLIP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ALCAMQ13740 583 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 CTTNQ14247 550 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 STXBP2Q15833 593 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 CCL14Q16627 93 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 KNOP1Q1ED39 458 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 PSRC1Q6PGN9 363 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 KCNV1Q6PIU1 500 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 POTEGQ6S5H5 508 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 SLC30A10Q6XR72 485 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ZNF365Q70YC5 407 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 OTUD6AQ7L8S5 288 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ZNF720Q7Z2F6 126 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 MIER3Q7Z3K6 550 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 CNGA4Q8IV77 575 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 FBXL6Q8N531 539 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 SHCBP1Q8NEM2 672 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 SOCS4Q8WXH5 440 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 EDAQ92838 391 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 KCNN1Q92952 543 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 DYDC2Q96IM9 177 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ERGIC2Q96RQ1 377 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 REEP2Q9BRK0 252 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 NTPCRQ9BSD7 190 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 TUBGCP2Q9BSJ2 902 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 MOV10L1Q9BXT6 1211 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 SPATC1LQ9H0A9 340 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 MTIF3Q9H2K0 278 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 KCTD10Q9H3F6 313 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 ST6GALNAC4Q9H4F1 302 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 MROH8Q9H579 483 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 CERS4Q9HA82 394 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 C17orf75Q9HAS0 396 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 A1CFQ9NQ94 594 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 HOMER2Q9NSB8 354 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 CGNQ9P2M7 1197 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 MUTYHQ9UIF7 546 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 FAM184BQ9ULE4 1060 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 PCDHB13Q9Y5F0 798 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 TPRP12270 2363 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 FASNP49327 2511 aaKnown RBP5.97□□□□□ -1.45
COL17A1-206ENST00000483876 UBE4BO95155 1302 aa5.97□□□□□ -1.45
COL17A1-206ENST00000483876 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-206ENST00000483876 A0A1W2PQJ5 194 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms