RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 COASYQ13057 564 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 DUSP6Q16828 381 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 PLPP4Q5VZY2 271 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 RNF135Q8IUD6 432 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 LPPQ93052 612 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 RNF216Q9NWF9 866 aaPredicted RBP20.24■□□□□ 0.83
ATG4B-221ENST00000483778 MUTYHQ9UIF7 546 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 NT5C1B-RDH14C9J2C7 533 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 AK2P54819 239 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 PSMC5P62195 406 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 PLCB3Q01970 1234 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 PPP2R5CQ13362 524 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 KCNC3Q14003 757 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 PIK3AP1Q6ZUJ8 805 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 RHPN2Q8IUC4 686 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 MRPS27Q92552 414 aaKnown RBP20.23■□□□□ 0.83
ATG4B-221ENST00000483778 PPP2R3CQ969Q6 453 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 FAM122AQ96E09 287 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 GCOM2Q9BZD3 368 aaPredicted RBP20.23■□□□□ 0.83
ATG4B-221ENST00000483778 RGL1Q9NZL6 768 aa20.23■□□□□ 0.83
ATG4B-221ENST00000483778 USP15Q9Y4E8 981 aaPredicted RBP20.23■□□□□ 0.83
ATG4B-221ENST00000483778 CCDC194A0A1B0GVG4 234 aa20.22■□□□□ 0.83
ATG4B-221ENST00000483778 PRR33A8MZF0 331 aa20.22■□□□□ 0.83
ATG4B-221ENST00000483778 NR5A1Q13285 461 aa20.22■□□□□ 0.83
ATG4B-221ENST00000483778 PPP4R3AQ6IN85 833 aa20.22■□□□□ 0.83
ATG4B-221ENST00000483778 NEK8Q86SG6 692 aa20.22■□□□□ 0.83
ATG4B-221ENST00000483778 FAM177A1Q8N128 213 aaPredicted RBP20.22■□□□□ 0.83
ATG4B-221ENST00000483778 ZNF710Q8N1W2 664 aa20.22■□□□□ 0.83
ATG4B-221ENST00000483778 ORC3Q9UBD5 711 aaPredicted RBP20.22■□□□□ 0.83
ATG4B-221ENST00000483778 STK36Q9NRP7 1315 aa20.22■□□□□ 0.83
ATG4B-221ENST00000483778 ZNF318Q5VUA4 2279 aa20.22■□□□□ 0.83
ATG4B-221ENST00000483778 WNT7AO00755 349 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 CCNT1O60563 726 aaKnown RBP20.21■□□□□ 0.83
ATG4B-221ENST00000483778 EOMESO95936 686 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 QARSP47897 775 aaKnown RBP20.21■□□□□ 0.83
ATG4B-221ENST00000483778 ME3Q16798 604 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 POTEDQ86YR6 584 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 TNFRSF25Q93038 417 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 FAM20AQ96MK3 541 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 NLRP4Q96MN2 994 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 ZNF558Q96NG5 402 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 TCF25Q9BQ70 676 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 APOL5Q9BWW9 433 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 S1PR5Q9H228 398 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 IFT122Q9HBG6 1241 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 CYP26B1Q9NR63 512 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 BMP2KQ9NSY1 1161 aaPredicted RBP20.21■□□□□ 0.83
ATG4B-221ENST00000483778 SPG21Q9NZD8 308 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 CDH22Q9UJ99 828 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 LZTS1Q9Y250 596 aa20.21■□□□□ 0.83
ATG4B-221ENST00000483778 HOXA2O43364 376 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 PHKA2P46019 1235 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 DNM2P50570 870 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 SPIRE1Q08AE8 756 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 CSPP1Q1MSJ5 1256 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 LLGL2Q6P1M3 1020 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 TMEM173Q86WV6 379 aaPredicted RBP20.2■□□□□ 0.82
ATG4B-221ENST00000483778 ABI1Q8IZP0 508 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 SLC39A11Q8N1S5 342 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 LRRC43Q8N309 656 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 TMEM143Q96AN5 459 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 MINDY3Q9H8M7 445 aa20.2■□□□□ 0.82
ATG4B-221ENST00000483778 WDFY4Q6ZS81 3184 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 LOC730098B7Z3J9 87 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 B4GALT3O60512 393 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 CDKL5O76039 1030 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 SEC24BO95487 1268 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 P4HBP07237 508 aaKnown RBP20.19■□□□□ 0.82
ATG4B-221ENST00000483778 FOSBP53539 338 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 BCAR1P56945 870 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 CTTNQ14247 550 aaKnown RBP20.19■□□□□ 0.82
ATG4B-221ENST00000483778 HERC4Q5GLZ8 1057 aaPredicted RBP20.19■□□□□ 0.82
ATG4B-221ENST00000483778 PDE12Q6L8Q7 609 aaKnown RBP20.19■□□□□ 0.82
ATG4B-221ENST00000483778 SYCE2Q6PIF2 218 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 PRPF31Q8WWY3 499 aaKnown RBP20.19■□□□□ 0.82
ATG4B-221ENST00000483778 SUSD6Q92537 303 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 DYDC2Q96IM9 177 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 ENTPD7Q9NQZ7 604 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 CHST12Q9NRB3 414 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 DACT1Q9NYF0 836 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 PUF60Q9UHX1 559 aaKnown RBP20.19■□□□□ 0.82
ATG4B-221ENST00000483778 HCN4Q9Y3Q4 1203 aa20.19■□□□□ 0.82
ATG4B-221ENST00000483778 A0A087WWV3 80 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 SRGAP2CP0DJJ0 459 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 TECP42680 631 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 AFF1P51825 1210 aaKnown RBP20.18■□□□□ 0.82
ATG4B-221ENST00000483778 EPHA7Q15375 998 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 TWF2Q6IBS0 349 aaKnown RBP20.18■□□□□ 0.82
ATG4B-221ENST00000483778 NCAPH2Q6IBW4 605 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 TMEM184AQ6ZMB5 413 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 HFE2Q6ZVN8 426 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 TMC7Q7Z402 723 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 ZNF410Q86VK4 478 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 BCL7CQ8WUZ0 217 aaPredicted RBP20.18■□□□□ 0.82
ATG4B-221ENST00000483778 CEP170P1Q96L14 293 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 DHX33Q9H6R0 707 aaKnown RBP20.18■□□□□ 0.82
ATG4B-221ENST00000483778 PPP4R2Q9NY27 417 aa20.18■□□□□ 0.82
ATG4B-221ENST00000483778 PIN4Q9Y237 131 aaKnown RBP20.18■□□□□ 0.82
ATG4B-221ENST00000483778 JAK2O60674 1132 aa20.17■□□□□ 0.82
ATG4B-221ENST00000483778 OFD1O75665 1012 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms