RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 GFPT1Q06210 699 aaPredicted RBP13.52□□□□□ -0.25
LINC00477-201ENST00000483544 DYNC1I2Q13409 638 aaKnown RBP13.52□□□□□ -0.25
LINC00477-201ENST00000483544 RAPGEF1Q13905 1077 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 MFSD4BQ5TF39 518 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 ZNF280DQ6N043 979 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 POTEEQ6S8J3 1075 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 CCDC80Q76M96 950 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 COL23A1Q86Y22 540 aaPredicted RBP13.52□□□□□ -0.25
LINC00477-201ENST00000483544 ZFPM1Q8IX07 1006 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 IFT20Q8IY31 132 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 NEK9Q8TD19 979 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 SPAG5Q96R06 1193 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 SUGCTQ9HAC7 445 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 EBF2Q9HAK2 575 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 PAPOLBQ9NRJ5 636 aaKnown RBP13.52□□□□□ -0.25
LINC00477-201ENST00000483544 VAV3Q9UKW4 847 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 TRPC6Q9Y210 931 aa13.52□□□□□ -0.25
LINC00477-201ENST00000483544 SRRM3A6NNA2 597 aaPredicted RBP13.51□□□□□ -0.25
LINC00477-201ENST00000483544 MSH4O15457 936 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 N4BP1O75113 896 aaKnown RBP13.51□□□□□ -0.25
LINC00477-201ENST00000483544 FLOT1O75955 427 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 ZNF76P36508 570 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 IKQ13123 557 aaPredicted RBP13.51□□□□□ -0.25
LINC00477-201ENST00000483544 PPP2R5CQ13362 524 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 CUL3Q13618 768 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 MEI1Q5TIA1 1274 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 ARMC3Q5W041 872 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 C8orf74Q6P047 294 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 CRELD2Q6UXH1 353 aaPredicted RBP13.51□□□□□ -0.25
LINC00477-201ENST00000483544 BZW1Q7L1Q6 419 aaKnown RBP13.51□□□□□ -0.25
LINC00477-201ENST00000483544 SFR1Q86XK3 245 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 KIAA0825Q8IV33 1275 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 CCHCR1Q8TD31 782 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 CHURC1Q8WUH1 139 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 LZICQ8WZA0 190 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 EIF2AK1Q9BQI3 630 aaKnown RBP13.51□□□□□ -0.25
LINC00477-201ENST00000483544 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 TMOD2Q9NZR1 351 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 TBC1D7Q9P0N9 293 aa13.51□□□□□ -0.25
LINC00477-201ENST00000483544 ZC3H4Q9UPT8 1303 aaKnown RBP13.51□□□□□ -0.25
LINC00477-201ENST00000483544 SMAPO00193 183 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 MGRN1O60291 552 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 SYF2O95926 243 aaKnown RBP13.5□□□□□ -0.25
LINC00477-201ENST00000483544 MMP10P09238 476 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 STAT3P40763 770 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 NPEPPSP55786 919 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 TCP10Q12799 353 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 PAK2Q13177 524 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 PABPC4Q13310 644 aaKnown RBP eCLIP13.5□□□□□ -0.25
LINC00477-201ENST00000483544 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
LINC00477-201ENST00000483544 NFRKBQ6P4R8 1299 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 FAM160B2Q86V87 743 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 GBP7Q8N8V2 638 aaPredicted RBP13.5□□□□□ -0.25
LINC00477-201ENST00000483544 TAF4BQ92750 862 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 ANKRD27Q96NW4 1050 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 WDR11Q9BZH6 1224 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 TRIM4Q9C037 500 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 SLC40A1Q9NP59 571 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
LINC00477-201ENST00000483544 MYH11P35749 1972 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 NPHP3-ACAD11A0A0J9YXS1 232 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 FAM86B1E9PN63 330 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 F8VZ95 297 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 IPO5O00410 1097 aaKnown RBP13.5□□□□□ -0.25
LINC00477-201ENST00000483544 RAD21O60216 631 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 SKAP2O75563 359 aaPredicted RBP13.5□□□□□ -0.25
LINC00477-201ENST00000483544 NR3C1P04150 777 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 FAM86B2P0C5J1 330 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 UCHL3P15374 230 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 RFX1P22670 979 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 STAT2P52630 851 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 SESN3P58005 492 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 TNNC1P63316 161 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 EPHA7Q15375 998 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 KIAA0753Q2KHM9 967 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 THEMIS2Q5TEJ8 643 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 DPY19L2P1Q6NXN4 242 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 IRF2BP2Q7Z5L9 587 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 FAM76AQ8TAV0 307 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 LRRC1Q9BTT6 524 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 FGFBP2Q9BYJ0 223 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 DEFB129Q9H1M3 183 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 ZHX3Q9H4I2 956 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 PLEKHA4Q9H4M7 779 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 SPATA7Q9P0W8 599 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 SALL4Q9UJQ4 1053 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 PRR12Q9ULL5 1215 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 TMEM98Q9Y2Y6 226 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 GMEB1Q9Y692 573 aa13.5□□□□□ -0.25
LINC00477-201ENST00000483544 RBBP6Q7Z6E9 1792 aaKnown RBP13.49□□□□□ -0.25
LINC00477-201ENST00000483544 A6NHS1 94 aa13.49□□□□□ -0.25
LINC00477-201ENST00000483544 PALMO75781 387 aa13.49□□□□□ -0.25
LINC00477-201ENST00000483544 FAM13AO94988 1023 aa13.49□□□□□ -0.25
LINC00477-201ENST00000483544 LUC7L3O95232 432 aaKnown RBP13.49□□□□□ -0.25
LINC00477-201ENST00000483544 PON1P27169 355 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms