RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 NFKBIZQ9BYH8 718 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 PRDM12Q9H4Q4 367 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 ELAC1Q9H777 363 aaKnown RBP20.02■□□□□ 0.8
HDAC6-225ENST00000483506 CHST12Q9NRB3 414 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 DDX19AQ9NUU7 478 aaKnown RBP20.02■□□□□ 0.8
HDAC6-225ENST00000483506 KIAA1024Q9UPX6 916 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 RALGAPA2Q2PPJ7 1873 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 ADGRA3Q8IWK6 1321 aa20.02■□□□□ 0.79
HDAC6-225ENST00000483506 CYP11B2P19099 503 aa20.01■□□□□ 0.79
HDAC6-225ENST00000483506 CDC25AP30304 524 aa20.01■□□□□ 0.79
HDAC6-225ENST00000483506 PTENP60484 403 aa20.01■□□□□ 0.79
HDAC6-225ENST00000483506 PTPAQ15257 358 aa20.01■□□□□ 0.79
HDAC6-225ENST00000483506 PCBP1Q15365 356 aaKnown RBP eCLIP20.01■□□□□ 0.79
HDAC6-225ENST00000483506 PADI6Q6TGC4 694 aa20.01■□□□□ 0.79
HDAC6-225ENST00000483506 ASAP3Q8TDY4 903 aa20.01■□□□□ 0.79
HDAC6-225ENST00000483506 TGS1Q96RS0 853 aaKnown RBP20.01■□□□□ 0.79
HDAC6-225ENST00000483506 NLRC5Q86WI3 1866 aa20.01■□□□□ 0.79
HDAC6-225ENST00000483506 COL4A4P53420 1690 aaPredicted RBP20■□□□□ 0.79
HDAC6-225ENST00000483506 ARHGEF35A5YM69 484 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 EPOPA6NHQ4 379 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 CSDE1O75534 798 aaKnown RBP20■□□□□ 0.79
HDAC6-225ENST00000483506 EYA4O95677 639 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 HSP90AA1P07900 732 aaKnown RBP20■□□□□ 0.79
HDAC6-225ENST00000483506 LINC00271P0C7V0 271 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 SRGAP2CP0DJJ0 459 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 FOSL2P15408 326 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 ZSCAN20P17040 1043 aaPredicted RBP20■□□□□ 0.79
HDAC6-225ENST00000483506 FGFR4P22455 802 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 GLRA2P23416 452 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 CAPSQ13938 189 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 TFDP1Q14186 410 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 SPRED2Q7Z698 418 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 RNF149Q8NC42 400 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 SAMD11Q96NU1 681 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 POLR3FQ9H1D9 316 aaPredicted RBP20■□□□□ 0.79
HDAC6-225ENST00000483506 BHMT2Q9H2M3 363 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 TMEM161AQ9NX61 479 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 CLIC4Q9Y696 253 aa20■□□□□ 0.79
HDAC6-225ENST00000483506 FNDC1Q4ZHG4 1894 aaPredicted RBP19.99■□□□□ 0.79
HDAC6-225ENST00000483506 EYSQ5T1H1 3165 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 POU3F3P20264 500 aaPredicted RBP19.99■□□□□ 0.79
HDAC6-225ENST00000483506 LONP1P36776 959 aaKnown RBP19.99■□□□□ 0.79
HDAC6-225ENST00000483506 PHKA2P46019 1235 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 ADGRE1Q14246 886 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 CMTR2Q8IYT2 770 aaKnown RBP19.99■□□□□ 0.79
HDAC6-225ENST00000483506 CLP1Q92989 425 aaKnown RBP19.99■□□□□ 0.79
HDAC6-225ENST00000483506 PNMA5Q96PV4 448 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 GAS2L1Q99501 681 aaPredicted RBP19.99■□□□□ 0.79
HDAC6-225ENST00000483506 NT5C3AQ9H0P0 336 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 MINDY3Q9H8M7 445 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 AGPAT5Q9NUQ2 364 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 DACT1Q9NYF0 836 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 DNM3Q9UQ16 869 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 PCDHB7Q9Y5E2 793 aa19.99■□□□□ 0.79
HDAC6-225ENST00000483506 A0A0U1RQF3 1178 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 GRB10Q13322 594 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 TMEM119Q4V9L6 283 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 FAM173BQ6P4H8 233 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 CATSPER4Q7RTX7 472 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 KCNK18Q7Z418 384 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 ARNTL2Q8WYA1 636 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 CERS4Q9HA82 394 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 GPRC5CQ9NQ84 441 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 LRFN2Q9ULH4 789 aa19.98■□□□□ 0.79
HDAC6-225ENST00000483506 E9PMD0 336 aa19.97■□□□□ 0.79
HDAC6-225ENST00000483506 LPXNO60711 386 aa19.97■□□□□ 0.79
HDAC6-225ENST00000483506 GRIN1Q05586 938 aa19.97■□□□□ 0.79
HDAC6-225ENST00000483506 CDCA2Q69YH5 1023 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-225ENST00000483506 ZNF598Q86UK7 904 aaKnown RBP19.97■□□□□ 0.79
HDAC6-225ENST00000483506 ECHDC2Q86YB7 292 aa19.97■□□□□ 0.79
HDAC6-225ENST00000483506 FIBCD1Q8N539 461 aa19.97■□□□□ 0.79
HDAC6-225ENST00000483506 USP28Q96RU2 1077 aa19.97■□□□□ 0.79
HDAC6-225ENST00000483506 C17orf80Q9BSJ5 609 aa19.97■□□□□ 0.79
HDAC6-225ENST00000483506 RWDD3Q9Y3V2 267 aa19.97■□□□□ 0.79
HDAC6-225ENST00000483506 EOMESO95936 686 aa19.96■□□□□ 0.79
HDAC6-225ENST00000483506 HOXA11P31270 313 aaPredicted RBP19.96■□□□□ 0.79
HDAC6-225ENST00000483506 NASPP49321 788 aaPredicted RBP19.96■□□□□ 0.79
HDAC6-225ENST00000483506 MBTD1Q05BQ5 628 aa19.96■□□□□ 0.79
HDAC6-225ENST00000483506 BTG3Q14201 252 aaPredicted RBP19.96■□□□□ 0.79
HDAC6-225ENST00000483506 FAM102BQ5T8I3 360 aa19.96■□□□□ 0.79
HDAC6-225ENST00000483506 CABP7Q86V35 215 aa19.96■□□□□ 0.79
HDAC6-225ENST00000483506 RNF19AQ9NV58 838 aa19.96■□□□□ 0.79
HDAC6-225ENST00000483506 FBXO2Q9UK22 296 aaPredicted RBP19.96■□□□□ 0.79
HDAC6-225ENST00000483506 PIN4Q9Y237 131 aaKnown RBP19.96■□□□□ 0.79
HDAC6-225ENST00000483506 SRPRBQ9Y5M8 271 aaKnown RBP19.96■□□□□ 0.79
HDAC6-225ENST00000483506 KIAA1671Q9BY89 1806 aa19.96■□□□□ 0.79
HDAC6-225ENST00000483506 C5orf67F2Z3F1 127 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 HOXA2O43364 376 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 ZSCAN22P10073 491 aaPredicted RBP19.95■□□□□ 0.78
HDAC6-225ENST00000483506 ATF7P17544 494 aaPredicted RBP19.95■□□□□ 0.78
HDAC6-225ENST00000483506 RAB27AP51159 221 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 SLC39A14Q15043 492 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 AMHR2Q16671 573 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 EPC2Q52LR7 807 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 C1orf186Q6ZWK4 172 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 TMEM192Q8IY95 271 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 BSNDQ8WZ55 320 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 KIFAP3Q92845 792 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 CCSER1Q9C0I3 900 aa19.95■□□□□ 0.78
HDAC6-225ENST00000483506 RFXAPO00287 272 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms