RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 ARL2P36404 184 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 HTRA4P83105 476 aaPredicted RBP14.88□□□□□ -0.03
SSR1-208ENST00000483409 TAP1Q03518 808 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 GRB10Q13322 594 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 BECN1Q14457 450 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 DSC3Q14574 896 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 MXD4Q14582 209 aaPredicted RBP14.88□□□□□ -0.03
SSR1-208ENST00000483409 FAM102BQ5T8I3 360 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 KCNK18Q7Z418 384 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 CABP7Q86V35 215 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 MCPH1Q8NEM0 835 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 CDK5RAP3Q96JB5 506 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 AK8Q96MA6 479 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 PNMA5Q96PV4 448 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 INO80BQ9C086 356 aaPredicted RBP14.88□□□□□ -0.03
SSR1-208ENST00000483409 CERS4Q9HA82 394 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 RGS18Q9NS28 235 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 DNM3Q9UQ16 869 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 INSL6Q9Y581 213 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 ASAP2O43150 1006 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 SLC34A2O95436 690 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 EYA4O95677 639 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 PDIA4P13667 645 aaKnown RBP14.87□□□□□ -0.03
SSR1-208ENST00000483409 ZSCAN20P17040 1043 aaPredicted RBP14.87□□□□□ -0.03
SSR1-208ENST00000483409 CYP11B2P19099 503 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 GLRA2P23416 452 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 LONP1P36776 959 aaKnown RBP14.87□□□□□ -0.03
SSR1-208ENST00000483409 UBA7P41226 1012 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 SARSP49591 514 aaKnown RBP14.87□□□□□ -0.03
SSR1-208ENST00000483409 CAPSQ13938 189 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 TFDP1Q14186 410 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 HYIQ5T013 277 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 SLC24A5Q71RS6 500 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 CATSPER4Q7RTX7 472 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 NPAS4Q8IUM7 802 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 MYLIPQ8WY64 445 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 CDX2Q99626 313 aaPredicted RBP14.87□□□□□ -0.03
SSR1-208ENST00000483409 PRDM12Q9H4Q4 367 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 MINDY3Q9H8M7 445 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 POLD4Q9HCU8 107 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 C1orf112Q9NSG2 853 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 TFIP11Q9UBB9 837 aaKnown RBP14.87□□□□□ -0.03
SSR1-208ENST00000483409 FBXO2Q9UK22 296 aaPredicted RBP14.87□□□□□ -0.03
SSR1-208ENST00000483409 LRFN2Q9ULH4 789 aa14.87□□□□□ -0.03
SSR1-208ENST00000483409 LINC01553A4QN01 128 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 LRRIQ4A6NIV6 560 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 C9IYK1 514 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 SSBP05455 408 aaKnown RBP eCLIP14.86□□□□□ -0.03
SSR1-208ENST00000483409 STAG3L1P0CL83 205 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 PHKA2P46019 1235 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 NASPP49321 788 aaPredicted RBP14.86□□□□□ -0.03
SSR1-208ENST00000483409 GATMP50440 423 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 STK38Q15208 465 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 TMEM119Q4V9L6 283 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 SPECC1Q5M775 1068 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 SRGAP1Q7Z6B7 1085 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 RASSF8Q8NHQ8 419 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 ZNF396Q96N95 335 aaPredicted RBP14.86□□□□□ -0.03
SSR1-208ENST00000483409 CLIC6Q96NY7 704 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 NT5C3AQ9H0P0 336 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 CSRNP2Q9H175 543 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 MTUS1Q9ULD2 1270 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 PIN4Q9Y237 131 aaKnown RBP14.86□□□□□ -0.03
SSR1-208ENST00000483409 PCDHB7Q9Y5E2 793 aa14.86□□□□□ -0.03
SSR1-208ENST00000483409 EPOPA6NHQ4 379 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 DGKIO75912 1065 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 PTENP60484 403 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 SLC39A14Q15043 492 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 KARSQ15046 597 aaKnown RBP14.85□□□□□ -0.03
SSR1-208ENST00000483409 PAN2Q504Q3 1202 aaKnown RBP14.85□□□□□ -0.03
SSR1-208ENST00000483409 USP49Q70CQ1 688 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 CRIPAKQ8N1N5 446 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
SSR1-208ENST00000483409 ARNTL2Q8WYA1 636 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 BSNDQ8WZ55 320 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 CALML4Q96GE6 196 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 EPSTI1Q96J88 318 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 RUSC1Q9BVN2 902 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 DAXXQ9UER7 740 aaPredicted RBP14.85□□□□□ -0.03
SSR1-208ENST00000483409 SRPRBQ9Y5M8 271 aaKnown RBP14.85□□□□□ -0.03
SSR1-208ENST00000483409 ADGRA3Q8IWK6 1321 aa14.85□□□□□ -0.03
SSR1-208ENST00000483409 INO80B-WBP1J3KQ70 363 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 RFXAPO00287 272 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 PLA2G4BP0C869 781 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 PLCG1P19174 1290 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 MBTD1Q05BQ5 628 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 TWF2Q6IBS0 349 aaKnown RBP14.84□□□□□ -0.03
SSR1-208ENST00000483409 RINT1Q6NUQ1 792 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 FAM43BQ6ZT52 329 aaPredicted RBP14.84□□□□□ -0.03
SSR1-208ENST00000483409 LINC00301Q8NCQ3 95 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 LRRC15Q8TF66 581 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 SYMPKQ92797 1274 aaKnown RBP14.84□□□□□ -0.03
SSR1-208ENST00000483409 TGS1Q96RS0 853 aaKnown RBP14.84□□□□□ -0.03
SSR1-208ENST00000483409 C17orf80Q9BSJ5 609 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 RC3H2Q9HBD1 1191 aaKnown RBP14.84□□□□□ -0.03
SSR1-208ENST00000483409 AGPAT5Q9NUQ2 364 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 DACT1Q9NYF0 836 aa14.84□□□□□ -0.03
SSR1-208ENST00000483409 COL6A3P12111 3177 aa14.83□□□□□ -0.03
SSR1-208ENST00000483409 EYSQ5T1H1 3165 aa14.83□□□□□ -0.04
SSR1-208ENST00000483409 SLC26A4O43511 780 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms