RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 TFRCP02786 760 aaKnown RBP13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 MMP3P08254 477 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 MYBP10242 640 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 MAPTP10636 758 aaKnown RBP13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 CTGFP29279 349 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 ABCD1P33897 745 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 ZNF75DP51815 510 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 ZNF131P52739 623 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 PEX3P56589 373 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 UBASH3AP57075 661 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 PPP2R5AQ15172 486 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 HS2ST1Q7LGA3 356 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 NECAB2Q7Z6G3 386 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 PCYT2Q99447 389 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 EPHX3Q9H6B9 360 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 C17orf75Q9HAS0 396 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 KMT5AQ9NQR1 393 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 SAMSN1Q9NSI8 373 aaKnown RBP13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 IFNKQ9P0W0 207 aa13.73□□□□□ -0.21
TSPAN1-208ENST00000482928 ARID2Q68CP9 1835 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 KCNJ18B7U540 433 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 GAS2O43903 313 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 PRPF6O94906 941 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 STBD1O95210 358 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 ZNF286BP0CG31 522 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 ZNF865P0CJ78 1059 aaPredicted RBP13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 RPL13P26373 211 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 DNM2P50570 870 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 CHMP4BP1P59074 171 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 KCNJ12Q14500 433 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 KNOP1Q1ED39 458 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 ZNF484Q5JVG2 852 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 TMEM63BQ5T3F8 832 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 ANKRD40Q6AI12 368 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 TTI2Q6NXR4 508 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 GOLGA5Q8TBA6 731 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 NECAB3Q96P71 396 aaPredicted RBP13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 ACCSQ96QU6 501 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 TMEM206Q9H813 350 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 GPRC5CQ9NQ84 441 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 SRRDQ9UH36 339 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 EXOC7Q9UPT5 735 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 Q9Y3F1 56 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 PCDHA2Q9Y5H9 948 aa13.72□□□□□ -0.21
TSPAN1-208ENST00000482928 MYH11P35749 1972 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 WDR81Q562E7 1941 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 ZEB2O60315 1214 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 MYL3P08590 195 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 ATP1A3P13637 1013 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 ATP4AP20648 1035 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 EEF1GP26641 437 aaKnown RBP13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 MTIF2P46199 727 aaKnown RBP13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 RTP1P59025 263 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 IGBP1P78318 339 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 MRPS5P82675 430 aaKnown RBP13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 NHLH1Q02575 133 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 MAPK7Q13164 816 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 ZNF720Q7Z2F6 126 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 GLIS3Q8NEA6 775 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 DEPTORQ8TB45 409 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 ZNF507Q8TCN5 953 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 SCFD1Q8WVM8 642 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 TRIB2Q92519 343 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 HVCN1Q96D96 273 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 MRFAP1L1Q96HT8 127 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 UNC93B1Q9H1C4 597 aa13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 TTYH1Q9H313 450 aaPredicted RBP13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 TYW1Q9NV66 732 aaKnown RBP13.71□□□□□ -0.21
TSPAN1-208ENST00000482928 COL1A2P08123 1366 aa13.71□□□□□ -0.22
TSPAN1-208ENST00000482928 H3BRB1 525 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 PDXKO00764 312 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 CETN3O15182 167 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 SLC16A4O15374 487 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 ADCY3O60266 1144 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 GNA14O95837 355 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 HMGCRP04035 888 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 RARBP10826 455 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 ZNF18P17022 549 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 SCP2P22307 547 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 CDC25BP30305 580 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 CASP5P51878 434 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 PMS1P54277 932 aaKnown RBP13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 FKBP3Q00688 224 aaKnown RBP13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 BMT2Q1RMZ1 405 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 TCP11X2Q5H9J9 407 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 CDKAL1Q5VV42 579 aa13.7□□□□□ -0.22
TSPAN1-208ENST00000482928 FOXR2Q6PJQ5 311 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms