RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 BHMT2Q9H2M3 363 aa20.43■□□□□ 0.86
SMIM4-204ENST00000482728 IFT122Q9HBG6 1241 aa20.43■□□□□ 0.86
SMIM4-204ENST00000482728 ARHGEF15O94989 841 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 ARL2P36404 184 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 UBA7P41226 1012 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 DSC3Q14574 896 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 FAM102BQ5T8I3 360 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 FAM173BQ6P4H8 233 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 POLR3FQ9H1D9 316 aaPredicted RBP20.42■□□□□ 0.86
SMIM4-204ENST00000482728 CHST12Q9NRB3 414 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 DACT1Q9NYF0 836 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 MTUS1Q9ULD2 1270 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 CLIC4Q9Y696 253 aa20.42■□□□□ 0.86
SMIM4-204ENST00000482728 C9IYK1 514 aa20.41■□□□□ 0.86
SMIM4-204ENST00000482728 DGKIO75912 1065 aa20.41■□□□□ 0.86
SMIM4-204ENST00000482728 CYP11B2P19099 503 aa20.41■□□□□ 0.86
SMIM4-204ENST00000482728 FAM189BP81408 668 aa20.41■□□□□ 0.86
SMIM4-204ENST00000482728 CEBPZQ03701 1054 aaKnown RBP20.41■□□□□ 0.86
SMIM4-204ENST00000482728 BTG3Q14201 252 aaPredicted RBP20.41■□□□□ 0.86
SMIM4-204ENST00000482728 FIBCD1Q8N539 461 aa20.41■□□□□ 0.86
SMIM4-204ENST00000482728 SP7Q8TDD2 431 aaPredicted RBP20.41■□□□□ 0.86
SMIM4-204ENST00000482728 EYA4O95677 639 aa20.4■□□□□ 0.86
SMIM4-204ENST00000482728 IGFBP4P22692 258 aa20.4■□□□□ 0.86
SMIM4-204ENST00000482728 LONP1P36776 959 aaKnown RBP20.4■□□□□ 0.86
SMIM4-204ENST00000482728 ERVK-21P61565 698 aa20.4■□□□□ 0.86
SMIM4-204ENST00000482728 NCBP1Q09161 790 aaKnown RBP20.4■□□□□ 0.86
SMIM4-204ENST00000482728 CHD9Q3L8U1 2897 aa20.4■□□□□ 0.86
SMIM4-204ENST00000482728 ARID2Q68CP9 1835 aa20.4■□□□□ 0.86
SMIM4-204ENST00000482728 KCTD17Q8N5Z5 321 aa20.4■□□□□ 0.86
SMIM4-204ENST00000482728 MMTAG2Q9BU76 263 aaKnown RBP20.4■□□□□ 0.86
SMIM4-204ENST00000482728 NT5C3AQ9H0P0 336 aa20.4■□□□□ 0.86
SMIM4-204ENST00000482728 GPRC5CQ9NQ84 441 aa20.4■□□□□ 0.86
SMIM4-204ENST00000482728 E9PMD0 336 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 GLRA2P23416 452 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 PTENP60484 403 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 POU5F1BQ06416 359 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 FOXD4L5Q5VV16 416 aaPredicted RBP20.39■□□□□ 0.85
SMIM4-204ENST00000482728 TWF2Q6IBS0 349 aaKnown RBP20.39■□□□□ 0.85
SMIM4-204ENST00000482728 CABP7Q86V35 215 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 CRIPAKQ8N1N5 446 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 RASSF8Q8NHQ8 419 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 ASAP3Q8TDY4 903 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 FOXD4L4Q8WXT5 416 aaPredicted RBP20.39■□□□□ 0.85
SMIM4-204ENST00000482728 CALML4Q96GE6 196 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 ZNF396Q96N95 335 aaPredicted RBP20.39■□□□□ 0.85
SMIM4-204ENST00000482728 SAMD11Q96NU1 681 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 PLIN2Q99541 437 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 ELAC1Q9H777 363 aaKnown RBP20.39■□□□□ 0.85
SMIM4-204ENST00000482728 TMEM161AQ9NX61 479 aa20.39■□□□□ 0.85
SMIM4-204ENST00000482728 PIN4Q9Y237 131 aaKnown RBP20.39■□□□□ 0.85
SMIM4-204ENST00000482728 ADGRA3Q8IWK6 1321 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 LRRIQ4A6NIV6 560 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 INO80B-WBP1J3KQ70 363 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 RFXAPO00287 272 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 SLC26A4O43511 780 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 ERLIN2O94905 339 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 MARCKSP29966 332 aaPredicted RBP20.38■□□□□ 0.85
SMIM4-204ENST00000482728 BECN1Q14457 450 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 SPRED2Q7Z698 418 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 RNF169Q8NCN4 708 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 ZNF689Q96CS4 500 aaPredicted RBP20.38■□□□□ 0.85
SMIM4-204ENST00000482728 C17orf80Q9BSJ5 609 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 MINDY3Q9H8M7 445 aa20.38■□□□□ 0.85
SMIM4-204ENST00000482728 A0A0U1RQF3 1178 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 GTPBP6O43824 516 aaPredicted RBP20.37■□□□□ 0.85
SMIM4-204ENST00000482728 SSBP05455 408 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMIM4-204ENST00000482728 ZSCAN22P10073 491 aaPredicted RBP20.37■□□□□ 0.85
SMIM4-204ENST00000482728 SKIP12755 728 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 CAPSQ13938 189 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 PTPAQ15257 358 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 PCBP1Q15365 356 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMIM4-204ENST00000482728 PAN2Q504Q3 1202 aaKnown RBP20.37■□□□□ 0.85
SMIM4-204ENST00000482728 HYIQ5T013 277 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 ECHDC2Q86YB7 292 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 TMEM192Q8IY95 271 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 CMTR2Q8IYT2 770 aaKnown RBP20.37■□□□□ 0.85
SMIM4-204ENST00000482728 FBXO22Q8NEZ5 403 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 KIFAP3Q92845 792 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 IFT74Q96LB3 600 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 USP28Q96RU2 1077 aa20.37■□□□□ 0.85
SMIM4-204ENST00000482728 HOXA2O43364 376 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 EOMESO95936 686 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 GRB10Q13322 594 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 ADGRE1Q14246 886 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 SLC39A14Q15043 492 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 PPP2R5AQ15172 486 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 STK38Q15208 465 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 EPC2Q52LR7 807 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 IFNLR1Q8IU57 520 aaPredicted RBP20.36■□□□□ 0.85
SMIM4-204ENST00000482728 ABI1Q8IZP0 508 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 MAFAQ8NHW3 353 aaPredicted RBP20.36■□□□□ 0.85
SMIM4-204ENST00000482728 PNMA5Q96PV4 448 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 AGPAT5Q9NUQ2 364 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 RWDD3Q9Y3V2 267 aa20.36■□□□□ 0.85
SMIM4-204ENST00000482728 SRPRBQ9Y5M8 271 aaKnown RBP20.36■□□□□ 0.85
SMIM4-204ENST00000482728 EPOPA6NHQ4 379 aa20.35■□□□□ 0.85
SMIM4-204ENST00000482728 TBKBP1A7MCY6 615 aa20.35■□□□□ 0.85
SMIM4-204ENST00000482728 GATMP50440 423 aa20.35■□□□□ 0.85
SMIM4-204ENST00000482728 GRIN1Q05586 938 aa20.35■□□□□ 0.85
SMIM4-204ENST00000482728 KCNK18Q7Z418 384 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms