RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 PLIN2Q99541 437 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 MTRQ99707 1265 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 NKX2-4Q9H2Z4 354 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 CDHR5Q9HBB8 845 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 DAXXQ9UER7 740 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 CLIC4Q9Y696 253 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 PRUNE2Q8WUY3 3088 aa11.14□□□□□ -0.63
SPTLC1-206ENST00000482632 DENND3A2RUS2 1198 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 TLL1O43897 1013 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 MAFO75444 373 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 BMP15O95972 392 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 SSBP05455 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 SPATA31C1P0DKV0 1188 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 MYOGP15173 224 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 FGFR4P22455 802 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 DNAJB2P25686 324 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 RPA1P27694 616 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 MARCKSP29966 332 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 GPC3P51654 580 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 RAB30Q15771 203 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 ODR4Q5SWX8 454 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 RASIP1Q5U651 963 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 EXOC8Q8IYI6 725 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 USP38Q8NB14 1042 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 PSPC1Q8WXF1 523 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 TIFAQ96CG3 184 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 NACC1Q96RE7 527 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 HSD17B14Q9BPX1 270 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 POLR3CQ9BUI4 534 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 PBX4Q9BYU1 374 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 ZSCAN16Q9H4T2 348 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 AGO3Q9H9G7 860 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 ATP6V0A4Q9HBG4 840 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 ANKEF1Q9NU02 776 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 DDX19AQ9NUU7 478 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 PADI3Q9ULW8 664 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 KIAA1024Q9UPX6 916 aa11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 NOC2LQ9Y3T9 749 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-206ENST00000482632 A0A087WZ62 844 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 GPR32O75388 356 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 CSDE1O75534 798 aaKnown RBP11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 SRGAP2CP0DJJ0 459 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 ZSCAN22P10073 491 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 RARRES1P49788 294 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 CRYBB1P53674 252 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 PDIA5Q14554 519 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 STK38Q15208 465 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 IL17AQ16552 155 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 KSR1Q8IVT5 923 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 HERC6Q8IVU3 1022 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 DEFB123Q8N688 67 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 LINC01465Q8N7H1 131 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 IGSF22Q8N9C0 903 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 TCP11Q8WWU5 503 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 FDXACB1Q9BRP7 624 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 GCOM2Q9BZD3 368 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 LRFN2Q9ULH4 789 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 ST3GAL5Q9UNP4 418 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 PPME1Q9Y570 386 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 COL4A3BPQ9Y5P4 624 aa11.12□□□□□ -0.63
SPTLC1-206ENST00000482632 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 MUC3AQ02505 3323 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 NLRC5Q86WI3 1866 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 GPR182O15218 404 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 GAS2O43903 313 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 DGAT1O75907 488 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 LYPLA2O95372 231 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 UBA7P41226 1012 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 ECM1Q16610 540 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 TSR1Q2NL82 804 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 ARL6IP4Q66PJ3 421 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 CABP7Q86V35 215 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 FAM228AQ86W67 206 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 TMEM40Q8WWA1 233 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 CALML4Q96GE6 196 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 ZNF396Q96N95 335 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 CEP89Q96ST8 783 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 YME1L1Q96TA2 773 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 POLR3FQ9H1D9 316 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 BHMT2Q9H2M3 363 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 DHX33Q9H6R0 707 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 SLC28A3Q9HAS3 691 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 TFIP11Q9UBB9 837 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 DNM3Q9UQ16 869 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 YBX2Q9Y2T7 364 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 PCDHA11Q9Y5I1 949 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 TCHHQ07283 1943 aa11.11□□□□□ -0.63
SPTLC1-206ENST00000482632 TTC3P53804 2025 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 IGKV6-21A0A0C4DH24 114 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 LRRIQ4A6NIV6 560 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 E9PMD0 336 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 F13A1P00488 732 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 CA3P07451 260 aa11.1□□□□□ -0.63
SPTLC1-206ENST00000482632 ZSCAN20P17040 1043 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms