RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 PRR5P85299 388 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 IRF9Q00978 393 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 BIRC3Q13489 604 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 GRM3Q14832 879 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 PLEKHN1Q494U1 663 aaPredicted RBP4.86□□□□□ -1.63
VPS41-212ENST00000482217 GJC2Q5T442 439 aaPredicted RBP4.86□□□□□ -1.63
VPS41-212ENST00000482217 RNF219Q5W0B1 726 aaPredicted RBP4.86□□□□□ -1.63
VPS41-212ENST00000482217 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.86□□□□□ -1.63
VPS41-212ENST00000482217 NOSTRINQ8IVI9 506 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 NXPE1Q8N323 547 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 NKAPQ8N5F7 415 aaKnown RBP4.86□□□□□ -1.63
VPS41-212ENST00000482217 NKAIN3Q8N8D7 197 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 APPL2Q8NEU8 664 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 HVCN1Q96D96 273 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 CCDC34Q96HJ3 373 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 XPO4Q9C0E2 1151 aaKnown RBP4.86□□□□□ -1.63
VPS41-212ENST00000482217 ZNF552Q9H707 407 aaPredicted RBP4.86□□□□□ -1.63
VPS41-212ENST00000482217 IFT22Q9H7X7 185 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 SMYD2Q9NRG4 433 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 MRGBPQ9NV56 204 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 FNIP2Q9P278 1114 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 DDX20Q9UHI6 824 aaKnown RBP4.86□□□□□ -1.63
VPS41-212ENST00000482217 APOBEC2Q9Y235 224 aaKnown RBP4.86□□□□□ -1.63
VPS41-212ENST00000482217 SIT1Q9Y3P8 196 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 ATP23Q9Y6H3 246 aa4.86□□□□□ -1.63
VPS41-212ENST00000482217 hCG_1642624A0A1W2PR95 340 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 TCAF2A6NFQ2 919 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 ZNF891A8MT65 544 aaPredicted RBP4.85□□□□□ -1.63
VPS41-212ENST00000482217 H7C1D1 291 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 ZBTB48P10074 688 aaPredicted RBP4.85□□□□□ -1.63
VPS41-212ENST00000482217 ATP2A2P16615 1042 aaKnown RBP4.85□□□□□ -1.63
VPS41-212ENST00000482217 SDHBP21912 280 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 IL2P60568 153 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 TUSC3Q13454 348 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 ZNF174Q15697 407 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 SKOR2Q2VWA4 1001 aaPredicted RBP4.85□□□□□ -1.63
VPS41-212ENST00000482217 ATP13A4Q4VNC1 1196 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 MZT2BQ6NZ67 158 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 FAM180BQ6P0A1 224 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 ZBTB46Q86UZ6 589 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 MIB1Q86YT6 1006 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 PASD1Q8IV76 773 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 EFHBQ8N7U6 833 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 ZSCAN18Q8TBC5 510 aaPredicted RBP4.85□□□□□ -1.63
VPS41-212ENST00000482217 WDR66Q8TBY9 1149 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 GJA10Q969M2 543 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 SH3KBP1Q96B97 665 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 CHMP4CQ96CF2 233 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 CD244Q9BZW8 370 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 RXFP1Q9HBX9 757 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 PGAP2Q9UHJ9 254 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 FBXO10Q9UK96 956 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 MAGED1Q9Y5V3 778 aaPredicted RBP4.85□□□□□ -1.63
VPS41-212ENST00000482217 B3GALT1Q9Y5Z6 326 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 TNKSO95271 1327 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 WASHC2AQ641Q2 1341 aa4.85□□□□□ -1.63
VPS41-212ENST00000482217 TEX51A0A1B0GUA7 166 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 ANO9A1A5B4 782 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 J3KRW8 73 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 NEMP1O14524 444 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 GABRDO14764 452 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 PMM2O15305 246 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 GPR39O43194 453 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 RFPL1O75677 317 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 FKBP9O95302 570 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 KRT1P04264 644 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 C1QTNF9P0C862 333 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 UBA7P41226 1012 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 ADCYAP1R1P41586 468 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 KPNA1P52294 538 aaPredicted RBP4.84□□□□□ -1.63
VPS41-212ENST00000482217 PSMC1P62191 440 aaKnown RBP4.84□□□□□ -1.63
VPS41-212ENST00000482217 APBA1Q02410 837 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 GRM1Q13255 1194 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 E2F5Q15329 346 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 ELF2Q15723 593 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 NBPF8Q3BBV2 869 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 SLC10A5Q5PT55 438 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 CREB3L3Q68CJ9 461 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 CYB5RLQ6IPT4 315 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 LDHAL6AQ6ZMR3 332 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 FKBP9P1Q75LS8 142 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 NECAB2Q7Z6G3 386 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 UBE2Q1Q7Z7E8 422 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 ZNF605Q86T29 641 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 C11orf74Q86VG3 221 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 NBPF5PQ86XG9 351 aaPredicted RBP4.84□□□□□ -1.63
VPS41-212ENST00000482217 FAM126BQ8IXS8 530 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 LSM14AQ8ND56 463 aaKnown RBP4.84□□□□□ -1.63
VPS41-212ENST00000482217 CHTF18Q8WVB6 975 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 CLEC4DQ8WXI8 215 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 DLG3Q92796 817 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 KCNN1Q92952 543 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 TRIM44Q96DX7 344 aaPredicted RBP4.84□□□□□ -1.63
VPS41-212ENST00000482217 PCIF1Q9H4Z3 704 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 ALG13Q9NP73 1137 aaKnown RBP4.84□□□□□ -1.63
VPS41-212ENST00000482217 CD320Q9NPF0 282 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 ACSS2Q9NR19 701 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 KCNH7Q9NS40 1196 aa4.84□□□□□ -1.63
VPS41-212ENST00000482217 BLOC1S4Q9NUP1 217 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms