RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 EPN3Q9H201 632 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 UNC45AQ9H3U1 944 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 QTRT2Q9H974 415 aaKnown RBP16.66■□□□□ 0.26
C9orf3-218ENST00000482056 ATXN2Q99700 1313 aaKnown RBP16.66■□□□□ 0.26
C9orf3-218ENST00000482056 BUB1BO60566 1050 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-218ENST00000482056 PPP1R37O75864 691 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 ECHS1P30084 290 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 LSP1P33241 339 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 TNIP1Q15025 636 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 RHOT2Q8IXI1 618 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 SUPT20HQ8NEM7 779 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 AKT1S1Q96B36 256 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 LXNQ9BS40 222 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 CARD9Q9H257 536 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 SEPT11Q9NVA2 429 aaKnown RBP16.66■□□□□ 0.26
C9orf3-218ENST00000482056 AMACRQ9UHK6 382 aa16.66■□□□□ 0.26
C9orf3-218ENST00000482056 ANKRD62A6NC57 917 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 PLA2G6O60733 806 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 KIAA0754O94854 1291 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 FGGP02679 453 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 MDH1P40925 334 aaKnown RBP16.65■□□□□ 0.26
C9orf3-218ENST00000482056 ECE1P42892 770 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 RRP1BQ14684 758 aaKnown RBP16.65■□□□□ 0.26
C9orf3-218ENST00000482056 KIF22Q14807 665 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 AOC3Q16853 763 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 CBWD6Q4V339 395 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 CBWD3Q5JTY5 395 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 CBWD5Q5RIA9 395 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 KSR1Q8IVT5 923 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 UBLCP1Q8WVY7 318 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-218ENST00000482056 PRMT6Q96LA8 375 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-218ENST00000482056 TMEM206Q9H813 350 aa16.65■□□□□ 0.26
C9orf3-218ENST00000482056 SMCHD1A6NHR9 2005 aa16.64■□□□□ 0.26
C9orf3-218ENST00000482056 IPO5O00410 1097 aaKnown RBP16.64■□□□□ 0.25
C9orf3-218ENST00000482056 ZBTB39O15060 712 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 HIP1RO75146 1068 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 CPP00450 1065 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 TRIM49P0CI25 452 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 TRIM49CP0CI26 452 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 MAPTP10636 758 aaKnown RBP16.64■□□□□ 0.25
C9orf3-218ENST00000482056 ABCB4P21439 1286 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 POLD1P28340 1107 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 UBXN2AP68543 259 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 PPATQ06203 517 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 ITGB3BPQ13352 177 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-218ENST00000482056 INTS8Q75QN2 995 aaKnown RBP16.64■□□□□ 0.25
C9orf3-218ENST00000482056 SEC14L1Q92503 715 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 CNKSR1Q969H4 720 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 SYT11Q9BT88 431 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 CENPHQ9H3R5 247 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 RABEP2Q9H5N1 569 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 OSGEPQ9NPF4 335 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 LARSQ9P2J5 1176 aaKnown RBP16.64■□□□□ 0.25
C9orf3-218ENST00000482056 BRWD3Q6RI45 1802 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 ANKRD65E5RJM6 399 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 K7ENM7 598 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 P4HA2O15460 535 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 DAPK3O43293 454 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 ITGA4P13612 1032 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 ARHGAP44Q17R89 818 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 SPDYCQ5MJ68 293 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 AGBL2Q5U5Z8 902 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 DDX42Q86XP3 938 aaKnown RBP eCLIP16.64■□□□□ 0.25
C9orf3-218ENST00000482056 ACER1Q8TDN7 264 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 AGPAT1Q99943 283 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 GPR88Q9GZN0 384 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 IKZF4Q9H2S9 585 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-218ENST00000482056 FEM1BQ9UK73 627 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 PFASO15067 1338 aa16.64■□□□□ 0.25
C9orf3-218ENST00000482056 DDX3YO15523 660 aaKnown RBP16.63■□□□□ 0.25
C9orf3-218ENST00000482056 TTI1O43156 1089 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 ARP10275 920 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 PTENP60484 403 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 GUCY1A3Q02108 690 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 PRPF4BQ13523 1007 aaKnown RBP16.63■□□□□ 0.25
C9orf3-218ENST00000482056 PLS1Q14651 629 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 PTGISQ16647 500 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 MIER3Q7Z3K6 550 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 ACCSQ96QU6 501 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 MXRA8Q9BRK3 442 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 STRA6Q9BX79 667 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 VCPKMTQ9H867 229 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 RASAL2Q9UJF2 1139 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 PPP1R9AQ9ULJ8 1098 aa16.63■□□□□ 0.25
C9orf3-218ENST00000482056 FAM187AA6NFU0 413 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 MIF4GDA9UHW6 222 aaKnown RBP16.62■□□□□ 0.25
C9orf3-218ENST00000482056 TCP10L2B9ZVM9 353 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 H0YGN5 161 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 HSPA6P17066 643 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 INPP5BP32019 993 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 CDR1P51861 262 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 HADHBP55084 474 aaKnown RBP16.62■□□□□ 0.25
C9orf3-218ENST00000482056 UAP1Q16222 522 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-218ENST00000482056 PADI6Q6TGC4 694 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 SLC30A10Q6XR72 485 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 MICALL1Q8N3F8 863 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 UBL4BQ8N7F7 174 aa16.62■□□□□ 0.25
C9orf3-218ENST00000482056 BANK1Q8NDB2 785 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms