RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 KCNB1Q14721 858 aa22.91■■□□□ 1.26
VPS16-207ENST00000481812 CCDC47Q96A33 483 aaKnown RBP22.91■■□□□ 1.26
VPS16-207ENST00000481812 GSDMAQ96QA5 445 aa22.91■■□□□ 1.26
VPS16-207ENST00000481812 NOC4LQ9BVI4 516 aaKnown RBP22.91■■□□□ 1.26
VPS16-207ENST00000481812 CELF4Q9BZC1 486 aaKnown RBP22.91■■□□□ 1.26
VPS16-207ENST00000481812 NUP62CLQ9H1M0 184 aa22.91■■□□□ 1.26
VPS16-207ENST00000481812 ADAMTS10Q9H324 1103 aa22.91■■□□□ 1.26
VPS16-207ENST00000481812 OLFML3Q9NRN5 406 aa22.91■■□□□ 1.26
VPS16-207ENST00000481812 TMEM39AQ9NV64 488 aa22.91■■□□□ 1.26
VPS16-207ENST00000481812 TRPV2Q9Y5S1 764 aa22.91■■□□□ 1.26
VPS16-207ENST00000481812 SQORQ9Y6N5 450 aa22.91■■□□□ 1.26
VPS16-207ENST00000481812 SFI1A8K8P3 1242 aa22.9■■□□□ 1.26
VPS16-207ENST00000481812 PARNO95453 639 aaKnown RBP22.9■■□□□ 1.26
VPS16-207ENST00000481812 CASP1P29466 404 aa22.9■■□□□ 1.26
VPS16-207ENST00000481812 CRYBB1P53674 252 aaPredicted RBP22.9■■□□□ 1.26
VPS16-207ENST00000481812 SMTNP53814 917 aa22.9■■□□□ 1.26
VPS16-207ENST00000481812 NLRP11P59045 1033 aaKnown RBP22.9■■□□□ 1.26
VPS16-207ENST00000481812 CACNB1Q02641 598 aaPredicted RBP22.9■■□□□ 1.26
VPS16-207ENST00000481812 DMP1Q13316 513 aaPredicted RBP22.9■■□□□ 1.26
VPS16-207ENST00000481812 PNOCQ13519 176 aa22.9■■□□□ 1.26
VPS16-207ENST00000481812 CAPSQ13938 189 aa22.9■■□□□ 1.26
VPS16-207ENST00000481812 NT5DC1Q5TFE4 455 aa22.9■■□□□ 1.26
VPS16-207ENST00000481812 MYCT1Q8N699 235 aa22.9■■□□□ 1.26
VPS16-207ENST00000481812 BSNDQ8WZ55 320 aa22.9■■□□□ 1.26
VPS16-207ENST00000481812 POLD4Q9HCU8 107 aa22.9■■□□□ 1.26
VPS16-207ENST00000481812 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.89■■□□□ 1.25
VPS16-207ENST00000481812 H0YCG3 227 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 RPN1P04843 607 aaKnown RBP22.89■■□□□ 1.25
VPS16-207ENST00000481812 SELPP16109 830 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 ABCD1P33897 745 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 NPTX2P47972 431 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 SARSP49591 514 aaKnown RBP22.89■■□□□ 1.25
VPS16-207ENST00000481812 PEX3P56589 373 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 PTENP60484 403 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 COASYQ13057 564 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 PSMD2Q13200 908 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 HERC4Q5GLZ8 1057 aaPredicted RBP22.89■■□□□ 1.25
VPS16-207ENST00000481812 ODR4Q5SWX8 454 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 ZNF618Q5T7W0 954 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 TRAF7Q6Q0C0 670 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 SRGAP1Q7Z6B7 1085 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 RNF149Q8NC42 400 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 GTPBP4Q9BZE4 634 aaKnown RBP22.89■■□□□ 1.25
VPS16-207ENST00000481812 INO80BQ9C086 356 aaPredicted RBP22.89■■□□□ 1.25
VPS16-207ENST00000481812 C2orf40Q9H1Z8 148 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 HIPK3Q9H422 1215 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 ST6GALNAC4Q9H4F1 302 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 IFT122Q9HBG6 1241 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 PCDHA5Q9Y5H7 936 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 CDY2AQ9Y6F7 541 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 TANC1Q9C0D5 1861 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 SIP14410 1827 aa22.89■■□□□ 1.25
VPS16-207ENST00000481812 MKI67P46013 3256 aaKnown RBP22.88■■□□□ 1.25
VPS16-207ENST00000481812 PHLPP2Q6ZVD8 1323 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 TRAK2O60296 914 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 RHOBTB3O94955 611 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 CHRNA1P02708 482 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 PHKA2P46019 1235 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 NCKAP1LP55160 1127 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 CDCA2Q69YH5 1023 aaPredicted RBP22.88■■□□□ 1.25
VPS16-207ENST00000481812 FAM43BQ6ZT52 329 aaPredicted RBP22.88■■□□□ 1.25
VPS16-207ENST00000481812 KSR1Q8IVT5 923 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 SMARCE1Q969G3 411 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 SYAP1Q96A49 352 aaPredicted RBP22.88■■□□□ 1.25
VPS16-207ENST00000481812 FIZ1Q96SL8 496 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 GCOM2Q9BZD3 368 aaPredicted RBP22.88■■□□□ 1.25
VPS16-207ENST00000481812 RMND1Q9NWS8 449 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 KIAA1468Q9P260 1216 aa22.88■■□□□ 1.25
VPS16-207ENST00000481812 A0A087WZ62 844 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 SRGAP2CP0DJJ0 459 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 EFNA5P52803 228 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 PCBP1Q15365 356 aaKnown RBP eCLIP22.87■■□□□ 1.25
VPS16-207ENST00000481812 CAMK4Q16566 473 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 KIZQ2M2Z5 673 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 KMT5BQ4FZB7 885 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 CCDC183Q5T5S1 534 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 RBM43Q6ZSC3 357 aaKnown RBP22.87■■□□□ 1.25
VPS16-207ENST00000481812 LRRC8DQ7L1W4 858 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 SFR1Q86XK3 245 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 FAM178BQ8IXR5 827 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 USP38Q8NB14 1042 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 NLRP7Q8WX94 980 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 NLRP4Q96MN2 994 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 FDXACB1Q9BRP7 624 aaPredicted RBP22.87■■□□□ 1.25
VPS16-207ENST00000481812 ZHX3Q9H4I2 956 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 TMEM134Q9H6X4 195 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 KMT5AQ9NQR1 393 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 EXOC1Q9NV70 894 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 ARHGAP28Q9P2N2 729 aa22.87■■□□□ 1.25
VPS16-207ENST00000481812 LRRIQ4A6NIV6 560 aa22.86■■□□□ 1.25
VPS16-207ENST00000481812 CCDC169A6NNP5 214 aa22.86■■□□□ 1.25
VPS16-207ENST00000481812 TIMP1P01033 207 aa22.86■■□□□ 1.25
VPS16-207ENST00000481812 DARSP14868 501 aaKnown RBP22.86■■□□□ 1.25
VPS16-207ENST00000481812 EIF4BP23588 611 aaKnown RBP22.86■■□□□ 1.25
VPS16-207ENST00000481812 TMEM62Q0P6H9 643 aa22.86■■□□□ 1.25
VPS16-207ENST00000481812 ALCAMQ13740 583 aa22.86■■□□□ 1.25
VPS16-207ENST00000481812 FAM26FQ5R3K3 315 aa22.86■■□□□ 1.25
VPS16-207ENST00000481812 ZNF720Q7Z2F6 126 aa22.86■■□□□ 1.25
VPS16-207ENST00000481812 ZBTB8OSQ8IWT0 167 aa22.86■■□□□ 1.25
VPS16-207ENST00000481812 DEPTORQ8TB45 409 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms